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    Fos Fos proto-oncogene, AP-1 transcription factor subunit [ Rattus rattus (black rat) ]

    Gene ID: 116905298, updated on 18-Mar-2024

    Summary

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    Gene symbol
    Fos
    Gene description
    Fos proto-oncogene, AP-1 transcription factor subunit
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus rattus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Orthologs
    human mouse all
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    Genomic context

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    See Fos in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current Rrattus_CSIRO_v1 (GCF_011064425.1) 7 NC_046160.1 (99575709..99579136)

    Chromosome 7 - NC_046160.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116905296 Neighboring gene uncharacterized LOC116905815 Neighboring gene Jun dimerization protein 2 Neighboring gene basic leucine zipper ATF-like transcription factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046160.1 Chromosome 7 Reference Rrattus_CSIRO_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation and characterization of the c-fos(rat) cDNA and analysis of post-translational modification in vitro. Curran T, et al. Oncogene, 1987. PMID 3325886
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proto-oncogene c-Fos

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rattus rattus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rrattus_CSIRO_v1 Primary Assembly

    Genomic

    1. NC_046160.1 Reference Rrattus_CSIRO_v1 Primary Assembly

      Range
      99575709..99579136
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032908166.1 → XP_032764057.1  proto-oncogene c-Fos

      Conserved Domains (1) summary
      cd14721
      Location:147 → 200
      bZIP_Fos; Basic leucine zipper (bZIP) domain of the oncogene Fos (Fos): a DNA-binding and dimerization domain
    Nucleotide Protein
    Heading Accession and Version

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