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    LOC118055857 phosphoinositide phospholipase C 6-like [ Populus alba (white poplar) ]

    Gene ID: 118055857, updated on 14-Dec-2024

    Summary

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    Gene symbol
    LOC118055857
    Gene description
    phosphoinositide phospholipase C 6-like
    Locus tag
    D5086_0000111780
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus alba
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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    Genomic context

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    See LOC118055857 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current ASM523922v1 (GCF_005239225.1) Unplaced Scaffold NW_023271583.1 (1198705..1203274, complement)

    NW_023271583.1Genomic Context describing neighboring genes Neighboring gene NF-X1-type zinc finger protein NFXL2-like Neighboring gene phosphoinositide phospholipase C 2-like Neighboring gene protein EARLY FLOWERING 4 Neighboring gene DNA replication complex GINS protein PSF3-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023271583 Unplaced Scaffold Reference ASM523922v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol phospholipase C activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phosphatidylinositol-mediated signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphoinositide phospholipase C 6-like
    Names
    phosphoinositide phospholipase C 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Populus alba Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM523922v1 Primary Assembly

    Genomic

    1. NW_023271583.1 Reference ASM523922v1 Primary Assembly

      Range
      1198705..1203274 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035067873.1 → XP_034923764.1  phosphoinositide phospholipase C 6-like

      UniProtKB/TrEMBL
      A0A4U5MYY1, A0A4U5QC42
      Conserved Domains (1) summary
      PLN02952
      Location:1 → 614
      PLN02952; phosphoinositide phospholipase C
    Nucleotide Protein
    Heading Accession and Version

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