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    LOC100911253 uncharacterized LOC100911253 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100911253, updated on 17-Aug-2024

    Summary

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    Symbol
    LOC100911253provided by RGD
    Full Name
    uncharacterized LOC100911253provided by RGD
    Primary source
    RGD:6493681
    See related
    EnsemblRapid:ENSRNOG00000062599 AllianceGenome:RGD:6493681
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Adrenal (RPKM 81.3), Lung (RPKM 57.2) and 7 other tissues See more
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    Genomic context

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    See LOC100911253 in Genome Data Viewer
    Location:
    Xq34
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (116623482..116739424, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (111829130..111944986, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (119196246..119223835, complement)

    Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 4, pseudogene 4 Neighboring gene histidine triad nucleotide binding protein 1, pseudogene 3 Neighboring gene uncharacterized LOC120099355 Neighboring gene poly(rC) binding protein 2, pseudogene 3 Neighboring gene U2 spliceosomal RNA Neighboring gene histidine triad nucleotide binding protein 1 Neighboring gene uncharacterized LOC134484156 Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 4, pseudogene 6 Neighboring gene uncharacterized LOC120099356 Neighboring gene poly(rC) binding protein 2, pseudogene 5 Neighboring gene poly(rC) binding protein 2, pseudogene 10 Neighboring gene poly(rC) binding protein 2, pseudogene 4 Neighboring gene U6 spliceosomal RNA Neighboring gene angiotensin II receptor, type 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086039.1 Reference GRCr8

      Range
      116623482..116739424 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_010061562.1 RNA Sequence

    2. XR_005498473.2 RNA Sequence

    3. XR_010061560.1 RNA Sequence

    4. XR_010061564.1 RNA Sequence

    5. XR_005498467.2 RNA Sequence

    6. XR_010061559.1 RNA Sequence

    7. XR_010061561.1 RNA Sequence

    8. XR_010061557.1 RNA Sequence

    9. XR_010061555.1 RNA Sequence

    10. XR_005498483.2 RNA Sequence

    11. XR_005498484.2 RNA Sequence

    12. XR_005498494.2 RNA Sequence

    13. XR_005498493.2 RNA Sequence

    14. XR_005498492.2 RNA Sequence

    15. XR_005498488.2 RNA Sequence

    16. XR_005498491.2 RNA Sequence

    17. XR_005498500.2 RNA Sequence

    18. XR_010061569.1 RNA Sequence

    19. XR_010061566.1 RNA Sequence

    20. XR_010061556.1 RNA Sequence

    21. XR_010061568.1 RNA Sequence

    22. XR_010061567.1 RNA Sequence

      Related
      ENSRNOT00000134043.1

    23. XR_010061563.1 RNA Sequence

    24. XR_010061565.1 RNA Sequence

    25. XR_010061558.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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