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    Fau FAU ubiquitin like and ribosomal protein S30 fusion [ Rattus rattus (black rat) ]

    Gene ID: 116890684, updated on 18-Mar-2024

    Summary

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    Gene symbol
    Fau
    Gene description
    FAU ubiquitin like and ribosomal protein S30 fusion
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus rattus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Orthologs
    human mouse all
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    Genomic context

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    See Fau in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current Rrattus_CSIRO_v1 (GCF_011064425.1) 2 NC_046155.1 (1632287..1633857, complement)

    Chromosome 2 - NC_046155.1Genomic Context describing neighboring genes Neighboring gene transmembrane 7 superfamily member 2 Neighboring gene zinc finger HIT-type containing 2 Neighboring gene mitochondrial ribosomal protein L49 Neighboring gene synoviolin 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046155.1 Chromosome 2 Reference Rrattus_CSIRO_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The carboxyl extension of a ubiquitin-like protein is rat ribosomal protein S30. Olvera J, et al. J Biol Chem, 1993 Aug 25. PMID 8394356
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin-like protein fubi and ribosomal protein S30
    Names
    fusion protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rattus rattus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rrattus_CSIRO_v1 Primary Assembly

    Genomic

    1. NC_046155.1 Reference Rrattus_CSIRO_v1 Primary Assembly

      Range
      1632287..1633857 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032891093.1 → XP_032746984.1  ubiquitin-like protein fubi and ribosomal protein S30

      Conserved Domains (2) summary
      cd01793
      Location:1 → 74
      Ubl_FUBI; ubiquitin-like (Ubl) domain found in ubiquitin-like protein FUBI and similar proteins
      pfam04758
      Location:75 → 132
      Ribosomal_S30; Ribosomal protein S30

    2. XM_032891094.1 → XP_032746985.1  ubiquitin-like protein fubi and ribosomal protein S30

      Conserved Domains (2) summary
      cd01793
      Location:1 → 74
      Ubl_FUBI; ubiquitin-like (Ubl) domain found in ubiquitin-like protein FUBI and similar proteins
      pfam04758
      Location:75 → 132
      Ribosomal_S30; Ribosomal protein S30

    3. XM_032891095.1 → XP_032746986.1  ubiquitin-like protein fubi and ribosomal protein S30

      Conserved Domains (2) summary
      cd01793
      Location:1 → 74
      Ubl_FUBI; ubiquitin-like (Ubl) domain found in ubiquitin-like protein FUBI and similar proteins
      pfam04758
      Location:75 → 132
      Ribosomal_S30; Ribosomal protein S30
    Nucleotide Protein
    Heading Accession and Version

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