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    SPPG_04702 rdgB/HAM1 family non-canonical purine NTP pyrophosphatase [ Spizellomyces punctatus DAOM BR117 ]

    Gene ID: 27688134, updated on 17-May-2024

    Summary

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    Gene symbol
    SPPG_04702
    Gene description
    rdgB/HAM1 family non-canonical purine NTP pyrophosphatase
    Locus tag
    SPPG_04702
    See related
    FungiDB:SPPG_04702; VEuPathDB:SPPG_04702
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Spizellomyces punctatus DAOM BR117 (strain: DAOM BR117)
    Lineage
    Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota; Chytridiomycota incertae sedis; Chytridiomycetes; Spizellomycetales; Spizellomycetaceae; Spizellomyces
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    Genomic context

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    See SPPG_04702 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_015971543.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene mRNA splicing protein SYF1 Neighboring gene replication factor C subunit 5 Neighboring gene small GTP-binding protein domain Neighboring gene GPI-anchor transamidase GPI18 Neighboring gene DNA ligase I, ATP-dependent (dnl1)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015971543.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleoside triphosphate diphosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nucleoside triphosphate catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rdgB/HAM1 family non-canonical purine NTP pyrophosphatase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_015971543.1 Reference assembly

      Range
      1017980..1018722
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016752933.1 → XP_016608417.1  rdgB/HAM1 family non-canonical purine NTP pyrophosphatase [Spizellomyces punctatus DAOM BR117]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L0HGY8
      Conserved Domains (1) summary
      cd00515
      Location:29 → 204
      HAM1; NTPase/HAM1. This family consists of the HAM1 protein and pyrophosphate-releasing xanthosine/ inosine triphosphatase. HAM1 protects the cell against mutagenesis by the base analog 6-N-hydroxylaminopurine (HAP) in E. Coli and S. cerevisiae. A ...
    Nucleotide Protein
    Heading Accession and Version

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