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    mago mago, exon junction complex subunit [ Eufriesea mexicana ]

    Gene ID: 108545371, updated on 10-Oct-2024

    Summary

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    Gene symbol
    mago
    Gene description
    mago, exon junction complex subunit
    Locus tag
    WN48_06286
    See related
    EnsemblRapid:LOC108545371
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Eufriesea mexicana
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Eufriesea
    Orthologs
    fruit fly honey bee all
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    Genomic context

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    See mago in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current ASM148370v1 (GCF_001483705.1) Unplaced Scaffold NW_016908583.1 (857038..857721, complement)

    NW_016908583.1Genomic Context describing neighboring genes Neighboring gene SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 Neighboring gene glycerophosphodiester phosphodiesterase domain-containing protein 1-like Neighboring gene synergin gamma-like Neighboring gene Transcription elongation factor subunit spt4 Neighboring gene geminin DNA replication inhibitor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_016908583.1 Unplaced Scaffold Reference ASM148370v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of exon-exon junction complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein mago nashi homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Eufriesea mexicana Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM148370v1

    Genomic

    1. NW_016908583.1 Reference ASM148370v1

      Range
      857038..857721 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017896942.1 → XP_017752431.1  protein mago nashi homolog

      Related
      XP_017752431.1, XM_017896942.1
      Conserved Domains (1) summary
      cd11295
      Location:4 → 146
      Mago_nashi; Mago nashi proteins, integral members of the exon junction complex
    Nucleotide Protein
    Heading Accession and Version

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