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    PCYT1A phosphate cytidylyltransferase 1A, choline [ Odocoileus virginianus (white-tailed deer) ]

    Gene ID: 110134923, updated on 15-Mar-2024

    Summary

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    Gene symbol
    PCYT1A
    Gene description
    phosphate cytidylyltransferase 1A, choline
    See related
    EnsemblRapid:ENSOVIG00010001700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Odocoileus virginianus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
    Orthologs
    human mouse all
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    Genomic context

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    See PCYT1A in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018331361.1 (279813..328822)

    NW_018331361.1Genomic Context describing neighboring genes Neighboring gene transmembrane 4 L six family member 19 Neighboring gene dynein light chain Tctex-type 2B Neighboring gene solute carrier family 51 member A Neighboring gene transferrin receptor Neighboring gene tyrosine kinase non receptor 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_018331361 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables choline-phosphate cytidylyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylcholine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in CDP-choline pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    choline-phosphate cytidylyltransferase A
    Names
    phosphate cytidylyltransferase 1, choline, alpha

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ovir.te_1.0 Primary Assembly

    Genomic

    1. NW_018331361.1 Reference Ovir.te_1.0 Primary Assembly

      Range
      279813..328822
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020889658.1 → XP_020745317.1  choline-phosphate cytidylyltransferase A isoform X1

      UniProtKB/TrEMBL
      A0A6J0X8R1
      Conserved Domains (1) summary
      cd02174
      Location:75 → 224
      CCT; CTP:phosphocholine cytidylyltransferase

    2. XM_020889657.1 → XP_020745316.1  choline-phosphate cytidylyltransferase A isoform X1

      UniProtKB/TrEMBL
      A0A6J0X8R1
      Conserved Domains (1) summary
      cd02174
      Location:75 → 224
      CCT; CTP:phosphocholine cytidylyltransferase

    3. XM_020889661.1 → XP_020745320.1  choline-phosphate cytidylyltransferase A isoform X2

      UniProtKB/TrEMBL
      A0A6J0X804
      Related
      ENSOVIP00010002397.1, ENSOVIT00010002716.1
      Conserved Domains (1) summary
      cd02174
      Location:75 → 224
      CCT; CTP:phosphocholine cytidylyltransferase

    4. XM_020889660.1 → XP_020745319.1  choline-phosphate cytidylyltransferase A isoform X2

      UniProtKB/TrEMBL
      A0A6J0X804
      Conserved Domains (1) summary
      cd02174
      Location:75 → 224
      CCT; CTP:phosphocholine cytidylyltransferase

    5. XM_020889656.1 → XP_020745315.1  choline-phosphate cytidylyltransferase A isoform X1

      UniProtKB/TrEMBL
      A0A6J0X8R1
      Related
      ENSOVIP00010002324.1, ENSOVIT00010002637.1
      Conserved Domains (1) summary
      cd02174
      Location:75 → 224
      CCT; CTP:phosphocholine cytidylyltransferase

    6. XM_020889664.1 → XP_020745323.1  choline-phosphate cytidylyltransferase A isoform X4

      UniProtKB/TrEMBL
      A0A6J0X5Y6
      Conserved Domains (1) summary
      cd02174
      Location:75 → 224
      CCT; CTP:phosphocholine cytidylyltransferase

    7. XM_020889663.1 → XP_020745322.1  choline-phosphate cytidylyltransferase A isoform X4

      UniProtKB/TrEMBL
      A0A6J0X5Y6
      Conserved Domains (1) summary
      cd02174
      Location:75 → 224
      CCT; CTP:phosphocholine cytidylyltransferase

    8. XM_020889659.1 → XP_020745318.1  choline-phosphate cytidylyltransferase A isoform X1

      UniProtKB/TrEMBL
      A0A6J0X8R1
      Conserved Domains (1) summary
      cd02174
      Location:75 → 224
      CCT; CTP:phosphocholine cytidylyltransferase

    9. XM_020889662.1 → XP_020745321.1  choline-phosphate cytidylyltransferase A isoform X3

      UniProtKB/TrEMBL
      A0A6J0X8R6
      Conserved Domains (1) summary
      cd02174
      Location:12 → 161
      CCT; CTP:phosphocholine cytidylyltransferase
    Nucleotide Protein
    Heading Accession and Version

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