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    SEMA3B semaphorin 3B [ Macaca nemestrina (pig-tailed macaque) ]

    Gene ID: 105480475, updated on 13-Mar-2024

    Summary

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    Gene symbol
    SEMA3B
    Gene description
    semaphorin 3B
    See related
    Ensembl:ENSMNEG00000029020
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca nemestrina
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SEMA3B in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012018354.1 (21145393..21157542)

    NW_012018354.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 38 member 3 Neighboring gene G protein subunit alpha i2 Neighboring gene uncharacterized LOC105480473 Neighboring gene leucine rich single-pass membrane protein 2 Neighboring gene interferon related developmental regulator 2 Neighboring gene hyaluronidase 3 Neighboring gene N-alpha-acetyltransferase 80, NatH catalytic subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012018354 Unplaced Scaffold Reference Mnem_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chemorepellent activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables semaphorin receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of axon extension involved in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neural crest cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in semaphorin-plexin signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    semaphorin-3B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mnem_1.0

    Genomic

    1. NW_012018354.1 Reference Mnem_1.0

      Range
      21145393..21157542
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011739410.2 → XP_011737712.1  semaphorin-3B isoform X1

      See identical proteins and their annotated locations for XP_011737712.1

      Conserved Domains (3) summary
      smart00423
      Location:541 → 577
      PSI; domain found in Plexins, Semaphorins and Integrins
      cl11960
      Location:601 → 691
      Ig; Immunoglobulin domain
      cl15693
      Location:46 → 542
      Sema; The Sema domain, a protein interacting module, of semaphorins and plexins

    2. XM_024792537.1 → XP_024648305.1  semaphorin-3B isoform X1

      Conserved Domains (3) summary
      smart00423
      Location:541 → 577
      PSI; domain found in Plexins, Semaphorins and Integrins
      cl11960
      Location:601 → 691
      Ig; Immunoglobulin domain
      cl15693
      Location:46 → 542
      Sema; The Sema domain, a protein interacting module, of semaphorins and plexins

    3. XM_011739411.2 → XP_011737713.1  semaphorin-3B isoform X1

      See identical proteins and their annotated locations for XP_011737713.1

      Conserved Domains (3) summary
      smart00423
      Location:541 → 577
      PSI; domain found in Plexins, Semaphorins and Integrins
      cl11960
      Location:601 → 691
      Ig; Immunoglobulin domain
      cl15693
      Location:46 → 542
      Sema; The Sema domain, a protein interacting module, of semaphorins and plexins

    4. XM_011739414.2 → XP_011737716.1  semaphorin-3B isoform X1

      See identical proteins and their annotated locations for XP_011737716.1

      Conserved Domains (3) summary
      smart00423
      Location:541 → 577
      PSI; domain found in Plexins, Semaphorins and Integrins
      cl11960
      Location:601 → 691
      Ig; Immunoglobulin domain
      cl15693
      Location:46 → 542
      Sema; The Sema domain, a protein interacting module, of semaphorins and plexins

    5. XM_011739418.2 → XP_011737720.1  semaphorin-3B isoform X3

      See identical proteins and their annotated locations for XP_011737720.1

      UniProtKB/TrEMBL
      A0A2K6BCM0
      Related
      ENSMNEP00000009140.1, ENSMNET00000033311.1
      Conserved Domains (3) summary
      smart00423
      Location:515 → 551
      PSI; domain found in Plexins, Semaphorins and Integrins
      cl11960
      Location:575 → 665
      Ig; Immunoglobulin domain
      cl15693
      Location:46 → 516
      Sema; The Sema domain, a protein interacting module, of semaphorins and plexins

    6. XM_011739419.2 → XP_011737721.1  semaphorin-3B isoform X4

      See identical proteins and their annotated locations for XP_011737721.1

      Conserved Domains (3) summary
      smart00423
      Location:514 → 550
      PSI; domain found in Plexins, Semaphorins and Integrins
      cl11960
      Location:574 → 664
      Ig; Immunoglobulin domain
      cl15693
      Location:46 → 515
      Sema; The Sema domain, a protein interacting module, of semaphorins and plexins

    7. XM_011739417.1 → XP_011737719.1  semaphorin-3B isoform X2

      Conserved Domains (3) summary
      smart00423
      Location:540 → 576
      PSI; domain found in Plexins, Semaphorins and Integrins
      cl11960
      Location:600 → 690
      Ig; Immunoglobulin domain
      cl15693
      Location:46 → 541
      Sema; The Sema domain, a protein interacting module, of semaphorins and plexins

    8. XM_011739409.2 → XP_011737711.1  semaphorin-3B isoform X1

      See identical proteins and their annotated locations for XP_011737711.1

      Conserved Domains (3) summary
      smart00423
      Location:541 → 577
      PSI; domain found in Plexins, Semaphorins and Integrins
      cl11960
      Location:601 → 691
      Ig; Immunoglobulin domain
      cl15693
      Location:46 → 542
      Sema; The Sema domain, a protein interacting module, of semaphorins and plexins

    9. XM_011739420.1 → XP_011737722.1  semaphorin-3B isoform X5

      Conserved Domains (3) summary
      smart00423
      Location:348 → 384
      PSI; domain found in Plexins, Semaphorins and Integrins
      cl11960
      Location:408 → 498
      Ig; Immunoglobulin domain
      cl15693
      Location:1 → 349
      Sema; The Sema domain, a protein interacting module, of semaphorins and plexins

    10. XM_011739421.1 → XP_011737723.1  semaphorin-3B isoform X6

      See identical proteins and their annotated locations for XP_011737723.1

      Conserved Domains (4) summary
      smart00423
      Location:172 → 208
      PSI; domain found in Plexins, Semaphorins and Integrins
      cd00096
      Location:231 → 237
      Ig; Ig strand A [structural motif]
      cl11960
      Location:231 → 322
      Ig; Immunoglobulin domain
      cl15693
      Location:1 → 173
      Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
    Nucleotide Protein
    Heading Accession and Version

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