U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    si:dkey-43k4.5 potassium voltage-gated channel subfamily S member 2 [ Acanthopagrus latus (yellowfin seabream) ]

    Gene ID: 119020434, updated on 21-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    si:dkey-43k4.5
    Gene description
    potassium voltage-gated channel subfamily S member 2
    See related
    EnsemblRapid:ENSALTG00010026046
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acanthopagrus latus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Acanthopagrus
    Orthologs
    zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See si:dkey-43k4.5 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current fAcaLat1.1 (GCF_904848185.1) 6 NC_051044.1 (2400098..2412936, complement)

    Chromosome 6 - NC_051044.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 6C-1 Neighboring gene serine/threonine-protein kinase 4-like Neighboring gene odorant receptor 131-2-like Neighboring gene odorant receptor 131-2-like Neighboring gene odorant receptor 131-2-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_051044.1 Chromosome 6 Reference fAcaLat1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables delayed rectifier potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein homooligomerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of delayed rectifier potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of voltage-gated potassium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    potassium voltage-gated channel subfamily S member 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Acanthopagrus latus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fAcaLat1.1 Primary Assembly

    Genomic

    1. NC_051044.1 Reference fAcaLat1.1 Primary Assembly

      Range
      2400098..2412936 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037099723.1 → XP_036955618.1  potassium voltage-gated channel subfamily S member 2

      Conserved Domains (2) summary
      cd18426
      Location:19 → 124
      BTB_POZ_KCNS1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium voltage-gated channel subfamily S member 1 (KCNS1)
      pfam00520
      Location:187 → 422
      Ion_trans; Ion transport protein

    2. XM_037099722.1 → XP_036955617.1  potassium voltage-gated channel subfamily S member 2

      Related
      ENSALTP00010069416.1, ENSALTT00010076508.1
      Conserved Domains (2) summary
      cd18426
      Location:19 → 124
      BTB_POZ_KCNS1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium voltage-gated channel subfamily S member 1 (KCNS1)
      pfam00520
      Location:187 → 422
      Ion_trans; Ion transport protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases