U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC100180378 triple QxxK/R motif-containing protein [ Ciona intestinalis (vase tunicate) ]

    Gene ID: 100180378, updated on 21-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100180378
    Gene description
    triple QxxK/R motif-containing protein
    See related
    Ensembl:ENSCING00000023253
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ciona intestinalis
    Lineage
    Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC100180378 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current KH (GCF_000224145.3) 3 NC_020168.2 (6145801..6147023, complement)

    Chromosome 3 - NC_020168.2Genomic Context describing neighboring genes Neighboring gene osteoclast-stimulating factor 1 Neighboring gene DBH-like monooxygenase protein 1 Neighboring gene octopamine receptor beta-1R-like Neighboring gene solute carrier family 49 member A3-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_020168.2 Chromosome 3 Reference KH Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. An integrated database of the ascidian, Ciona intestinalis: towards functional genomics. Satou Y, et al. Zoolog Sci, 2005 Aug. PMID 16141696
    2. A cDNA resource from the basal chordate Ciona intestinalis. Satou Y, et al. Genesis, 2002 Aug. PMID 12203911
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    triple QxxK/R motif-containing protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference KH Primary Assembly

    Genomic

    1. NC_020168.2 Reference KH Primary Assembly

      Range
      6145801..6147023 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002126350.5 → XP_002126386.1  triple QxxK/R motif-containing protein

      UniProtKB/TrEMBL
      A0A1W2W7Q1, H2XVM2
      Related
      ENSCINP00000033706
      Conserved Domains (1) summary
      pfam15168
      Location:1 → 76
      TRIQK; Triple QxxK/R motif-containing protein family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.