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    Aadacl2 arylacetamide deacetylase-like 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 295076, updated on 9-Dec-2024

    Summary

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    Symbol
    Aadacl2provided by RGD
    Full Name
    arylacetamide deacetylase-like 2provided by RGD
    Primary source
    RGD:1563197
    See related
    EnsemblRapid:ENSRNOG00000073541 AllianceGenome:RGD:1563197
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1563197
    Summary
    Orthologous to human AADACL2 (arylacetamide deacetylase like 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 5.4) and Lung (RPKM 4.0) See more
    Orthologs
    human all
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    Genomic context

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    See Aadacl2 in Genome Data Viewer
    Location:
    2q31
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (146273344..146293953)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (144123557..144144159)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (150344307..150365033)

    Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene AADACL2 family member 3 like 1 Neighboring gene AADACL2 family member 2 like 1 Neighboring gene uncharacterized LOC134485919 Neighboring gene arylacetamide deacetylase Neighboring gene uncharacterized LOC134485920 Neighboring gene succinate receptor 1 Neighboring gene uncharacterized LOC102551458

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    arylacetamide deacetylase-like 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001191706.1 → NP_001178635.1  arylacetamide deacetylase-like 2

      See identical proteins and their annotated locations for NP_001178635.1

      Status: PROVISIONAL

      Source sequence(s)
      JAXUCZ010000002
      UniProtKB/TrEMBL
      M0R5D4
      Related
      ENSRNOP00000106241.1, ENSRNOT00000128386.1
      Conserved Domains (2) summary
      COG0657
      Location:75 → 372
      Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
      pfam07859
      Location:107 → 372
      Abhydrolase_3; alpha/beta hydrolase fold

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086020.1 Reference GRCr8

      Range
      146273344..146293953
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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