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    PCYT1A phosphate cytidylyltransferase 1A, choline [ Bos taurus (domestic cattle) ]

    Gene ID: 100125779, updated on 4-Oct-2024

    Summary

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    Official Symbol
    PCYT1Aprovided by VGNC
    Official Full Name
    phosphate cytidylyltransferase 1A, cholineprovided by VGNC
    Primary source
    VGNC:VGNC:32652
    See related
    BGD:BT15595; Ensembl:ENSBTAG00000016979
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See PCYT1A in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (70824603..70877837, complement)

    Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene transferrin receptor Neighboring gene zinc finger DHHC-type palmitoyltransferase 19 Neighboring gene solute carrier family 51 subunit alpha Neighboring gene dynein light chain Tctex-type 2B Neighboring gene transmembrane 4 L six family member 19 Neighboring gene UBX domain protein 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Clone Names

    • MGC137206

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables choline-phosphate cytidylyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylcholine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in CDP-choline pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    choline-phosphate cytidylyltransferase A
    Names
    phosphate cytidylyltransferase 1, choline, alpha
    NP_001098522.1
    XP_005201441.1
    XP_010799457.1
    XP_015326880.1
    XP_059733589.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001105052.2 → NP_001098522.1  choline-phosphate cytidylyltransferase A

      See identical proteins and their annotated locations for NP_001098522.1

      Status: PROVISIONAL

      Source sequence(s)
      BC112538
      UniProtKB/TrEMBL
      Q2KIR5
      Related
      ENSBTAP00000022580.3, ENSBTAT00000022580.4
      Conserved Domains (1) summary
      cd02174
      Location:75 → 224
      CCT; CTP:phosphocholine cytidylyltransferase

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      70824603..70877837 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015471394.3 → XP_015326880.1  choline-phosphate cytidylyltransferase A isoform X1

      UniProtKB/TrEMBL
      A0A3Q1M4Q5
      Conserved Domains (1) summary
      cd02174
      Location:75 → 224
      CCT; CTP:phosphocholine cytidylyltransferase

    2. XM_005201384.5 → XP_005201441.1  choline-phosphate cytidylyltransferase A isoform X1

      See identical proteins and their annotated locations for XP_005201441.1

      UniProtKB/TrEMBL
      A0A3Q1M4Q5
      Conserved Domains (1) summary
      cd02174
      Location:75 → 224
      CCT; CTP:phosphocholine cytidylyltransferase

    3. XM_010801155.4 → XP_010799457.1  choline-phosphate cytidylyltransferase A isoform X1

      See identical proteins and their annotated locations for XP_010799457.1

      UniProtKB/TrEMBL
      A0A3Q1M4Q5
      Related
      ENSBTAP00000064803.1, ENSBTAT00000076382.2
      Conserved Domains (1) summary
      cd02174
      Location:75 → 224
      CCT; CTP:phosphocholine cytidylyltransferase

    4. XM_059877606.1 → XP_059733589.1  choline-phosphate cytidylyltransferase A isoform X1

      UniProtKB/TrEMBL
      A0A3Q1M4Q5
    Nucleotide Protein Strain
    Heading Accession and Version

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