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    Zfp532 zinc finger protein 532 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 307362, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Zfp532provided by RGD
    Official Full Name
    zinc finger protein 532provided by RGD
    Primary source
    RGD:1311719
    See related
    EnsemblRapid:ENSRNOG00000017116 AllianceGenome:RGD:1311719
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Znf532
    Summary
    Predicted to enable DNA binding activity and metal ion binding activity. Predicted to be located in nucleus. Orthologous to human ZNF532 (zinc finger protein 532). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Brain (RPKM 67.1), Heart (RPKM 58.4) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Zfp532 in Genome Data Viewer
    Location:
    18q12.1
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 18 NC_086036.1 (61350084..61473653)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 18 NC_051353.1 (59080082..59203672)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 18 NC_005117.4 (61257522..61368371)

    Chromosome 18 - NC_086036.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L13A, pseudogene 6 Neighboring gene 60S acidic ribosomal protein P1-like Neighboring gene keratin-associated protein 10-4-like Neighboring gene O-acyltransferase like Neighboring gene SEC11 homolog C, signal peptidase complex subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    zinc finger protein 532

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001107382.1 → NP_001100852.1  zinc finger protein 532

      See identical proteins and their annotated locations for NP_001100852.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473971
      UniProtKB/TrEMBL
      A6IXQ6, D4A659
      Related
      ENSRNOP00000059551.1, ENSRNOT00000064250.3
      Conserved Domains (2) summary
      sd00017
      Location:1057 → 1077
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam16622
      Location:1230 → 1258
      zf-C2H2_11; zinc-finger C2H2-type

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086036.1 Reference GRCr8

      Range
      61350084..61473653
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039096798.2 → XP_038952726.1  zinc finger protein 532 isoform X3

      Conserved Domains (4) summary
      sd00017
      Location:1031 → 1051
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam02591
      Location:788 → 823
      zf-RING_7; C4-type zinc ribbon domain
      pfam13912
      Location:1270 → 1291
      zf-C2H2_6; C2H2-type zinc finger
      pfam16622
      Location:1204 → 1232
      zf-C2H2_11; zinc-finger C2H2-type

    2. XM_063277316.1 → XP_063133386.1  zinc finger protein 532 isoform X2

    3. XM_063277321.1 → XP_063133391.1  zinc finger protein 532 isoform X8

    4. XM_063277324.1 → XP_063133394.1  zinc finger protein 532 isoform X11

    5. XM_063277322.1 → XP_063133392.1  zinc finger protein 532 isoform X9

    6. XM_063277323.1 → XP_063133393.1  zinc finger protein 532 isoform X10

    7. XM_063277325.1 → XP_063133395.1  zinc finger protein 532 isoform X12

    8. XM_063277318.1 → XP_063133388.1  zinc finger protein 532 isoform X5

      UniProtKB/TrEMBL
      A0A8I6A3F9

    9. XM_063277319.1 → XP_063133389.1  zinc finger protein 532 isoform X6

      UniProtKB/TrEMBL
      A0A8I6A3F9
      Related
      ENSRNOP00000111225.1, ENSRNOT00000148713.1

    10. XM_063277315.1 → XP_063133385.1  zinc finger protein 532 isoform X1

      UniProtKB/TrEMBL
      A0A0G2JZQ5
      Related
      ENSRNOP00000071139.1, ENSRNOT00000082403.3

    11. XM_063277320.1 → XP_063133390.1  zinc finger protein 532 isoform X7

      UniProtKB/TrEMBL
      A0A8I6A3F9
      Related
      ENSRNOP00000085177.1, ENSRNOT00000099718.2

    12. XM_006254866.4 → XP_006254928.1  zinc finger protein 532 isoform X4

      See identical proteins and their annotated locations for XP_006254928.1

      Conserved Domains (4) summary
      sd00017
      Location:1024 → 1044
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam02591
      Location:781 → 816
      zf-RING_7; C4-type zinc ribbon domain
      pfam13912
      Location:1263 → 1284
      zf-C2H2_6; C2H2-type zinc finger
      pfam16622
      Location:1197 → 1225
      zf-C2H2_11; zinc-finger C2H2-type

    13. XM_063277317.1 → XP_063133387.1  zinc finger protein 532 isoform X4

    14. XM_006254865.5 → XP_006254927.1  zinc finger protein 532 isoform X4

      See identical proteins and their annotated locations for XP_006254927.1

      Conserved Domains (4) summary
      sd00017
      Location:1024 → 1044
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam02591
      Location:781 → 816
      zf-RING_7; C4-type zinc ribbon domain
      pfam13912
      Location:1263 → 1284
      zf-C2H2_6; C2H2-type zinc finger
      pfam16622
      Location:1197 → 1225
      zf-C2H2_11; zinc-finger C2H2-type

    15. XM_006254873.5 → XP_006254935.1  zinc finger protein 532 isoform X4

      See identical proteins and their annotated locations for XP_006254935.1

      Conserved Domains (4) summary
      sd00017
      Location:1024 → 1044
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam02591
      Location:781 → 816
      zf-RING_7; C4-type zinc ribbon domain
      pfam13912
      Location:1263 → 1284
      zf-C2H2_6; C2H2-type zinc finger
      pfam16622
      Location:1197 → 1225
      zf-C2H2_11; zinc-finger C2H2-type

    16. XM_006254869.4 → XP_006254931.1  zinc finger protein 532 isoform X4

      See identical proteins and their annotated locations for XP_006254931.1

      Related
      ENSRNOP00000111614.1, ENSRNOT00000130809.1
      Conserved Domains (4) summary
      sd00017
      Location:1024 → 1044
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam02591
      Location:781 → 816
      zf-RING_7; C4-type zinc ribbon domain
      pfam13912
      Location:1263 → 1284
      zf-C2H2_6; C2H2-type zinc finger
      pfam16622
      Location:1197 → 1225
      zf-C2H2_11; zinc-finger C2H2-type

    17. XM_039096799.2 → XP_038952727.1  zinc finger protein 532 isoform X4

      Conserved Domains (4) summary
      sd00017
      Location:1024 → 1044
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam02591
      Location:781 → 816
      zf-RING_7; C4-type zinc ribbon domain
      pfam13912
      Location:1263 → 1284
      zf-C2H2_6; C2H2-type zinc finger
      pfam16622
      Location:1197 → 1225
      zf-C2H2_11; zinc-finger C2H2-type

    18. XM_006254868.5 → XP_006254930.1  zinc finger protein 532 isoform X4

      See identical proteins and their annotated locations for XP_006254930.1

      Conserved Domains (4) summary
      sd00017
      Location:1024 → 1044
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam02591
      Location:781 → 816
      zf-RING_7; C4-type zinc ribbon domain
      pfam13912
      Location:1263 → 1284
      zf-C2H2_6; C2H2-type zinc finger
      pfam16622
      Location:1197 → 1225
      zf-C2H2_11; zinc-finger C2H2-type

    19. XM_039096801.2 → XP_038952729.1  zinc finger protein 532 isoform X4

      Conserved Domains (4) summary
      sd00017
      Location:1024 → 1044
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam02591
      Location:781 → 816
      zf-RING_7; C4-type zinc ribbon domain
      pfam13912
      Location:1263 → 1284
      zf-C2H2_6; C2H2-type zinc finger
      pfam16622
      Location:1197 → 1225
      zf-C2H2_11; zinc-finger C2H2-type

    20. XM_017600947.3 → XP_017456436.1  zinc finger protein 532 isoform X4

      Conserved Domains (4) summary
      sd00017
      Location:1024 → 1044
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam02591
      Location:781 → 816
      zf-RING_7; C4-type zinc ribbon domain
      pfam13912
      Location:1263 → 1284
      zf-C2H2_6; C2H2-type zinc finger
      pfam16622
      Location:1197 → 1225
      zf-C2H2_11; zinc-finger C2H2-type

    RNA

    1. XR_010059568.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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