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    PHSY_007510 ubiquitin carboxyl-terminal hydrolase 2 [ Pseudozyma hubeiensis SY62 ]

    Gene ID: 24112773, updated on 9-Nov-2023

    Summary

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    Gene symbol
    PHSY_007510
    Gene description
    ubiquitin carboxyl-terminal hydrolase 2
    Locus tag
    PHSY_007510
    Gene type
    protein coding
    RNA name
    ubiquitin carboxyl-terminal hydrolase 2
    RefSeq status
    PROVISIONAL
    Organism
    Pseudozyma hubeiensis SY62 (strain: SY62)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; mitosporic Ustilaginaceae; Pseudozyma
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    Genomic context

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    See PHSY_007510 in Genome Data Viewer
    Exon count:
    1

    NW_012133852.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012133852.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft Genome Sequence of the Basidiomycetous Yeast-Like Fungus Pseudozyma hubeiensis SY62, Which Produces an Abundant Amount of the Biosurfactant Mannosylerythritol Lipids. Konishi M, et al. Genome Announc, 2013 Jun 27. PMID 23814110, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    ubiquitin carboxyl-terminal hydrolase 2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_012133852.1 Reference assembly

      Range
      304298..308557 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012338104.1 → XP_012193494.1  ubiquitin carboxyl-terminal hydrolase 2 [Pseudozyma hubeiensis SY62]

      See identical proteins and their annotated locations for XP_012193494.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      R9PF98
      Conserved Domains (6) summary
      COG5560
      Location:240 → 1318
      UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
      cd02674
      Location:1133 → 1315
      Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
      cl02553
      Location:536 → 721
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
      pfam06337
      Location:240 → 331
      DUSP; DUSP domain
      pfam14533
      Location:709 → 799
      USP7_C2; Ubiquitin-specific protease C-terminal
      pfam14920
      Location:52 → 160
      MTBP_C; MDM2-binding
    Nucleotide Protein
    Heading Accession and Version

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