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    Foxo1 forkhead box O1 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

    Gene ID: 101967490, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Foxo1
    Gene description
    forkhead box O1
    See related
    EnsemblRapid:ENSSTOG00015008898
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ictidomys tridecemlineatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
    Also known as
    FoxO1a
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See Foxo1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024404945.1 (161725964..161815163)
    102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936565.1 (5210014..5299213)

    NW_024404945.1Genomic Context describing neighboring genes Neighboring gene BCL2/adenovirus E1B 19 kDa protein-interacting protein 2-like Neighboring gene mitochondrial ribosomal protein S31 Neighboring gene uncharacterized LOC120888681 Neighboring gene uncharacterized LOC110598655

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning and characterization of a forkhead transcription factor gene, FoxO1a, from thirteen-lined ground squirrel. Cai D, et al. Gene, 2004 Dec 8. PMID 15563846
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in insulin receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    forkhead box protein O1
    Names
    Forkhead box protein O1A
    Forkhead in rhabdomyosarcoma
    forkhead box O1a protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001282256.1 → NP_001269185.1  forkhead box protein O1

      See identical proteins and their annotated locations for NP_001269185.1

      Status: PROVISIONAL

      Source sequence(s)
      AY255525
      UniProtKB/Swiss-Prot
      Q810W5
      UniProtKB/TrEMBL
      I3ME15
      Related
      ENSSTOP00015010989.1, ENSSTOT00015012054.1
      Conserved Domains (3) summary
      cd00059
      Location:158 → 238
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16675
      Location:421 → 498
      FOXO_KIX_bdg; KIX-binding domain of forkhead box O, CR2
      pfam16676
      Location:595 → 631
      FOXO-TAD; Transactivation domain of FOXO protein family

    RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HiC_Itri_2 Primary Assembly

    Genomic

    1. NW_024404945.1 Reference HiC_Itri_2 Primary Assembly

      Range
      161725964..161815163
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q810W5.1 GenPept UniProtKB/Swiss-Prot:Q810W5

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