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    bath-3 BTB domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 186649, updated on 18-Sep-2024

    Summary

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    Official Symbol
    bath-3
    Official Full Name
    BTB domain-containing protein
    Primary source
    WormBase:WBGene00019140
    Locus tag
    CELE_F59H6.10
    See related
    AllianceGenome:WB:WBGene00019140
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See bath-3 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003280.10 (2029236..2030467, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene BTB domain-containing protein Neighboring gene Cyclin-like domain-containing protein Neighboring gene BTB domain-containing protein Neighboring gene BTB domain-containing protein Neighboring gene BTB domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mutation in histone deacetylase HDA-3 leads to shortened locomotor healthspan in Caenorhabditis elegans. Kawamura K, et al. Aging (Albany NY), 2020 Dec 3. PMID 33276344, Free PMC Article
    2. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    BTB domain-containing protein
    NP_494157.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      2029236..2030467 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_061756.4 → NP_494157.2  BTB domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494157.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N5P9
      Conserved Domains (3) summary
      smart00225
      Location:151 → 246
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00651
      Location:145 → 243
      BTB; BTB/POZ domain
      pfam00917
      Location:14 → 128
      MATH; MATH domain
    Nucleotide Protein
    Heading Accession and Version

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