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    LOC106180677 centrosomal protein of 170 kDa protein B [ Lingula anatina ]

    Gene ID: 106180677, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC106180677
    Gene description
    centrosomal protein of 170 kDa protein B
    See related
    EnsemblRapid:LOC106180677
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lingula anatina
    Lineage
    Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Brachiopoda; Linguliformea; Lingulata; Lingulida; Linguloidea; Lingulidae; Lingula
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    Genomic context

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    See LOC106180677 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    101 current LinAna2.0 (GCF_001039355.2) Unplaced Scaffold NW_019773781.1 (589534..639818)
    100 previous assembly LinAna1.0 (GCF_001039355.1) Unplaced Scaffold NW_013580717.1 (30295..80587, complement)

    NW_019773781.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106180661 Neighboring gene serologically defined colon cancer antigen 8 homolog Neighboring gene tripartite motif-containing protein 3-like Neighboring gene B1 bradykinin receptor-like Neighboring gene leucine-rich repeat-containing protein 74A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Lingula genome provides insights into brachiopod evolution and the origin of phosphate biomineralization. Luo YJ, et al. Nat Commun, 2015 Sep 18. PMID 26383154, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    centrosomal protein of 170 kDa protein B

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Lingula anatina Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference LinAna2.0 Primary Assembly

    Genomic

    1. NW_019773781.1 Reference LinAna2.0 Primary Assembly

      Range
      589534..639818
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013564727.2 → XP_013420181.1  centrosomal protein of 170 kDa protein B isoform X3

      UniProtKB/TrEMBL
      A0A1S3KD47
      Related
      XP_013420181.1, XM_013564727.2
      Conserved Domains (2) summary
      cd00060
      Location:26 → 102
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15308
      Location:1017 → 1223
      CEP170_C; CEP170 C-terminus

    2. XM_013564733.2 → XP_013420187.1  centrosomal protein of 170 kDa protein B isoform X3

      UniProtKB/TrEMBL
      A0A1S3KD47
      Related
      XP_013420187.1, XM_013564733.2
      Conserved Domains (2) summary
      cd00060
      Location:26 → 102
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15308
      Location:1017 → 1223
      CEP170_C; CEP170 C-terminus

    3. XM_024074550.1 → XP_023930318.1  centrosomal protein of 170 kDa protein B isoform X3

      UniProtKB/TrEMBL
      A0A1S3KD47
      Related
      XP_023930318.1, XM_024074550.1
      Conserved Domains (2) summary
      cd00060
      Location:26 → 102
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15308
      Location:1017 → 1223
      CEP170_C; CEP170 C-terminus

    4. XM_024074551.1 → XP_023930319.1  centrosomal protein of 170 kDa protein B isoform X3

      UniProtKB/TrEMBL
      A0A1S3KD47
      Related
      XP_023930319.1, XM_024074551.1
      Conserved Domains (2) summary
      cd00060
      Location:26 → 102
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15308
      Location:1017 → 1223
      CEP170_C; CEP170 C-terminus

    5. XM_024074549.1 → XP_023930317.1  centrosomal protein of 170 kDa protein B isoform X3

      UniProtKB/TrEMBL
      A0A1S3KD47
      Related
      XP_023930317.1, XM_024074549.1
      Conserved Domains (2) summary
      cd00060
      Location:26 → 102
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15308
      Location:1017 → 1223
      CEP170_C; CEP170 C-terminus

    6. XM_013564728.2 → XP_013420182.1  centrosomal protein of 170 kDa protein B isoform X3

      UniProtKB/TrEMBL
      A0A1S3KD47
      Related
      XP_013420182.1, XM_013564728.2
      Conserved Domains (2) summary
      cd00060
      Location:26 → 102
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15308
      Location:1017 → 1223
      CEP170_C; CEP170 C-terminus

    7. XM_013564730.2 → XP_013420184.1  centrosomal protein of 170 kDa protein B isoform X3

      UniProtKB/TrEMBL
      A0A1S3KD47
      Related
      XP_013420184.1, XM_013564730.2
      Conserved Domains (2) summary
      cd00060
      Location:26 → 102
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15308
      Location:1017 → 1223
      CEP170_C; CEP170 C-terminus

    8. XM_013564726.2 → XP_013420180.1  centrosomal protein of 170 kDa protein B isoform X2

      UniProtKB/TrEMBL
      A0A1S3KC22
      Related
      XP_013420180.1, XM_013564726.2
      Conserved Domains (2) summary
      COG1716
      Location:41 → 121
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      cd00060
      Location:38 → 114
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...

    9. XM_013564732.2 → XP_013420186.1  centrosomal protein of 170 kDa protein B isoform X3

      UniProtKB/TrEMBL
      A0A1S3KD47
      Related
      XP_013420186.1, XM_013564732.2
      Conserved Domains (2) summary
      cd00060
      Location:26 → 102
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15308
      Location:1017 → 1223
      CEP170_C; CEP170 C-terminus

    10. XM_013564725.2 → XP_013420179.1  centrosomal protein of 170 kDa protein B isoform X1

      UniProtKB/TrEMBL
      A0A1S3KCL3
      Related
      XP_013420179.1, XM_013564725.2
      Conserved Domains (2) summary
      COG1716
      Location:64 → 144
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      cd00060
      Location:61 → 137
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...

    11. XM_013564734.2 → XP_013420188.1  centrosomal protein of 170 kDa protein B isoform X3

      UniProtKB/TrEMBL
      A0A1S3KD47
      Related
      XP_013420188.1, XM_013564734.2
      Conserved Domains (2) summary
      cd00060
      Location:26 → 102
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15308
      Location:1017 → 1223
      CEP170_C; CEP170 C-terminus
    Nucleotide Protein
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