| Sample | Title | Value | Rank |
|---|
| GSM42559 | Control Proximal, Small Intestine 1 17 days old | 13.1 | 13 |
| GSM42561 | Control Proximal, Small Intestine 2 17 days old | 9.9 | 12 |
| GSM42563 | Control Proximal, Small Intestine 3 17 days old | 26.5 | 22 |
| GSM42553 | Control Distal, Small Intestine 1 17 days old | 13.5 | 14 |
| GSM42555 | Control Distal, Small Intestine 2 17 days old | 11.8 | 13 |
| GSM42557 | Control Distal, Small Intestine 3 17 days old | 20.4 | 18 |
| GSM42548 | Control Colon 1 17 days old | 35.4 | 24 |
| GSM42550 | Control Colon 2 17 days old | 52.1 | 33 |
| GSM42560 | Control Proximal, Small Intestine 1 21 days old | 7.2 | 8 |
| GSM42562 | Control Proximal, Small Intestine 2 21 days old | 9.1 | 11 |
| GSM42564 | Control Proximal, Small Intestine 3 21 days old | 25.2 | 22 |
| GSM42554 | Control Distal, Small Intestine 1 21 days old | 31.6 | 24 |
| GSM42556 | Control Distal, Small Intestine 2 21 days old | 11.3 | 13 |
| GSM42558 | Control Distal, Small Intestine 3 21 days old | 17.9 | 15 |
| GSM42549 | Control Colon 1 21 days old | 69.7 | 39 |
| GSM42551 | Control Colon 2 21 days old | 66 | 39 |
| GSM42552 | Control Colon 3 21 days old | 27.1 | 21 |
| GSM42541 | Amoxicillin treated Proximal, Small Intestine 1 17 days old | 9.9 | 10 |
| GSM42543 | Amoxicillin treated Proximal, Small Intestine 2 17 days old | 9.9 | 10 |
| GSM42546 | Amoxicillin treated Proximal, Small Intestine 3 17 days old | 6.8 | 8 |
| GSM42534 | Amoxicillin treated Distal, Small Intestine 1 17 days old | 25.8 | 22 |
| GSM42536 | Amoxicillin treated Distal, Small Intestine 2 17 days old | 10.9 | 12 |
| GSM42539 | Amoxicillin treated Distal, Small Intestine 3 17 days old | 17.7 | 17 |
| GSM42527 | Amoxicillin treated Colon 1 17 days old | 10.6 | 11 |
| GSM42529 | Amoxicillin treated Colon 2 17 days old | 48.1 | 29 |
| GSM42532 | Amoxicillin treated Colon 3 17 days old | 49.4 | 32 |
| GSM42542 | Amoxicillin treated Proximal, Small Intestine 1 21 days old | 5.3 | 7 |
| GSM42544 | Amoxicillin treated Proximal, Small Intestine 2 21 days old | 11.8 | 13 |
| GSM42547 | Amoxicillin treated Proximal, Small Intestine 3 21 days old | 9.5 | 10 |
| GSM42535 | Amoxicillin treated Distal, Small Intestine 1 21 days old | 7.6 | 9 |
| GSM42537 | Amoxicillin treated Distal, Small Intestine 2 21 days old | 4.6 | 6 |
| GSM42540 | Amoxicillin treated Distal, Small Intestine 3 21 days old | 12.1 | 13 |
| GSM42528 | Amoxicillin treated Colon 1 21 days old | 26 | 20 |
| GSM42530 | Amoxicillin treated Colon 2 21 days old | 39.4 | 26 |
| GSM42533 | Amoxicillin treated Colon 3 21 days old | 49.6 | 30 |