| Sample | Title | Value | Rank |
|---|
| GSM42559 | Control Proximal, Small Intestine 1 17 days old | 16 | 15 |
| GSM42561 | Control Proximal, Small Intestine 2 17 days old | 3 | 4 |
| GSM42563 | Control Proximal, Small Intestine 3 17 days old | 34.1 | 26 |
| GSM42553 | Control Distal, Small Intestine 1 17 days old | 4.7 | 6 |
| GSM42555 | Control Distal, Small Intestine 2 17 days old | 4.6 | 7 |
| GSM42557 | Control Distal, Small Intestine 3 17 days old | 3.7 | 5 |
| GSM42548 | Control Colon 1 17 days old | 18.1 | 15 |
| GSM42550 | Control Colon 2 17 days old | 9.2 | 10 |
| GSM42560 | Control Proximal, Small Intestine 1 21 days old | 33.4 | 23 |
| GSM42562 | Control Proximal, Small Intestine 2 21 days old | 28 | 24 |
| GSM42564 | Control Proximal, Small Intestine 3 21 days old | 19 | 18 |
| GSM42554 | Control Distal, Small Intestine 1 21 days old | 15.8 | 15 |
| GSM42556 | Control Distal, Small Intestine 2 21 days old | 22.6 | 19 |
| GSM42558 | Control Distal, Small Intestine 3 21 days old | 23.2 | 18 |
| GSM42549 | Control Colon 1 21 days old | 34.7 | 24 |
| GSM42551 | Control Colon 2 21 days old | 19.6 | 17 |
| GSM42552 | Control Colon 3 21 days old | 19.9 | 17 |
| GSM42541 | Amoxicillin treated Proximal, Small Intestine 1 17 days old | 29.1 | 19 |
| GSM42543 | Amoxicillin treated Proximal, Small Intestine 2 17 days old | 51.8 | 32 |
| GSM42546 | Amoxicillin treated Proximal, Small Intestine 3 17 days old | 39.5 | 27 |
| GSM42534 | Amoxicillin treated Distal, Small Intestine 1 17 days old | 4.3 | 7 |
| GSM42536 | Amoxicillin treated Distal, Small Intestine 2 17 days old | 15.9 | 15 |
| GSM42539 | Amoxicillin treated Distal, Small Intestine 3 17 days old | 9.6 | 11 |
| GSM42527 | Amoxicillin treated Colon 1 17 days old | 13.5 | 12 |
| GSM42529 | Amoxicillin treated Colon 2 17 days old | 6.4 | 7 |
| GSM42532 | Amoxicillin treated Colon 3 17 days old | 7.4 | 9 |
| GSM42542 | Amoxicillin treated Proximal, Small Intestine 1 21 days old | 2.3 | 2 |
| GSM42544 | Amoxicillin treated Proximal, Small Intestine 2 21 days old | 7.4 | 10 |
| GSM42547 | Amoxicillin treated Proximal, Small Intestine 3 21 days old | 10.3 | 10 |
| GSM42535 | Amoxicillin treated Distal, Small Intestine 1 21 days old | 10.5 | 12 |
| GSM42537 | Amoxicillin treated Distal, Small Intestine 2 21 days old | 24.3 | 19 |
| GSM42540 | Amoxicillin treated Distal, Small Intestine 3 21 days old | 9.8 | 12 |
| GSM42528 | Amoxicillin treated Colon 1 21 days old | 55.8 | 34 |
| GSM42530 | Amoxicillin treated Colon 2 21 days old | 14.5 | 13 |
| GSM42533 | Amoxicillin treated Colon 3 21 days old | 25.2 | 18 |