| Sample | Title | Value | Rank |
|---|
| GSM42559 | Control Proximal, Small Intestine 1 17 days old | 8.5 | 10 |
| GSM42561 | Control Proximal, Small Intestine 2 17 days old | 33.5 | 25 |
| GSM42563 | Control Proximal, Small Intestine 3 17 days old | 15.5 | 15 |
| GSM42553 | Control Distal, Small Intestine 1 17 days old | 33.1 | 26 |
| GSM42555 | Control Distal, Small Intestine 2 17 days old | 28.2 | 23 |
| GSM42557 | Control Distal, Small Intestine 3 17 days old | 28.5 | 23 |
| GSM42548 | Control Colon 1 17 days old | 47.1 | 30 |
| GSM42550 | Control Colon 2 17 days old | 10.8 | 11 |
| GSM42560 | Control Proximal, Small Intestine 1 21 days old | 24.6 | 19 |
| GSM42562 | Control Proximal, Small Intestine 2 21 days old | 40.7 | 31 |
| GSM42564 | Control Proximal, Small Intestine 3 21 days old | 22.5 | 20 |
| GSM42554 | Control Distal, Small Intestine 1 21 days old | 26.1 | 21 |
| GSM42556 | Control Distal, Small Intestine 2 21 days old | 37.1 | 27 |
| GSM42558 | Control Distal, Small Intestine 3 21 days old | 11.7 | 11 |
| GSM42549 | Control Colon 1 21 days old | 11.5 | 12 |
| GSM42551 | Control Colon 2 21 days old | 40.4 | 28 |
| GSM42552 | Control Colon 3 21 days old | 16.1 | 15 |
| GSM42541 | Amoxicillin treated Proximal, Small Intestine 1 17 days old | 30 | 20 |
| GSM42543 | Amoxicillin treated Proximal, Small Intestine 2 17 days old | 11.5 | 12 |
| GSM42546 | Amoxicillin treated Proximal, Small Intestine 3 17 days old | 10.6 | 11 |
| GSM42534 | Amoxicillin treated Distal, Small Intestine 1 17 days old | 45.9 | 33 |
| GSM42536 | Amoxicillin treated Distal, Small Intestine 2 17 days old | 19.8 | 17 |
| GSM42539 | Amoxicillin treated Distal, Small Intestine 3 17 days old | 20.4 | 18 |
| GSM42527 | Amoxicillin treated Colon 1 17 days old | 8.8 | 9 |
| GSM42529 | Amoxicillin treated Colon 2 17 days old | 11 | 11 |
| GSM42532 | Amoxicillin treated Colon 3 17 days old | 11.8 | 13 |
| GSM42542 | Amoxicillin treated Proximal, Small Intestine 1 21 days old | 30.1 | 24 |
| GSM42544 | Amoxicillin treated Proximal, Small Intestine 2 21 days old | 33 | 26 |
| GSM42547 | Amoxicillin treated Proximal, Small Intestine 3 21 days old | 18.5 | 15 |
| GSM42535 | Amoxicillin treated Distal, Small Intestine 1 21 days old | 37.4 | 28 |
| GSM42537 | Amoxicillin treated Distal, Small Intestine 2 21 days old | 30.5 | 23 |
| GSM42540 | Amoxicillin treated Distal, Small Intestine 3 21 days old | 41.3 | 30 |
| GSM42528 | Amoxicillin treated Colon 1 21 days old | 23.6 | 19 |
| GSM42530 | Amoxicillin treated Colon 2 21 days old | 7.4 | 8 |
| GSM42533 | Amoxicillin treated Colon 3 21 days old | 9.3 | 10 |