| Sample | Title | Value | Rank |
|---|
| GSM42559 | Control Proximal, Small Intestine 1 17 days old | 9.8 | 11 |
| GSM42561 | Control Proximal, Small Intestine 2 17 days old | 53 | 34 |
| GSM42563 | Control Proximal, Small Intestine 3 17 days old | 19.1 | 17 |
| GSM42553 | Control Distal, Small Intestine 1 17 days old | 6 | 8 |
| GSM42555 | Control Distal, Small Intestine 2 17 days old | 2.4 | 3 |
| GSM42557 | Control Distal, Small Intestine 3 17 days old | 5.3 | 7 |
| GSM42548 | Control Colon 1 17 days old | 3.9 | 5 |
| GSM42550 | Control Colon 2 17 days old | 7.8 | 9 |
| GSM42560 | Control Proximal, Small Intestine 1 21 days old | 30.7 | 22 |
| GSM42562 | Control Proximal, Small Intestine 2 21 days old | 14.1 | 15 |
| GSM42564 | Control Proximal, Small Intestine 3 21 days old | 38.1 | 29 |
| GSM42554 | Control Distal, Small Intestine 1 21 days old | 5.8 | 7 |
| GSM42556 | Control Distal, Small Intestine 2 21 days old | 9.9 | 12 |
| GSM42558 | Control Distal, Small Intestine 3 21 days old | 46.4 | 31 |
| GSM42549 | Control Colon 1 21 days old | 8.3 | 9 |
| GSM42551 | Control Colon 2 21 days old | 7.6 | 9 |
| GSM42552 | Control Colon 3 21 days old | 4.7 | 7 |
| GSM42541 | Amoxicillin treated Proximal, Small Intestine 1 17 days old | 21.5 | 16 |
| GSM42543 | Amoxicillin treated Proximal, Small Intestine 2 17 days old | 14.3 | 13 |
| GSM42546 | Amoxicillin treated Proximal, Small Intestine 3 17 days old | 21.8 | 18 |
| GSM42534 | Amoxicillin treated Distal, Small Intestine 1 17 days old | 10.2 | 12 |
| GSM42536 | Amoxicillin treated Distal, Small Intestine 2 17 days old | 5 | 6 |
| GSM42539 | Amoxicillin treated Distal, Small Intestine 3 17 days old | 19.1 | 17 |
| GSM42527 | Amoxicillin treated Colon 1 17 days old | 10.3 | 10 |
| GSM42529 | Amoxicillin treated Colon 2 17 days old | 6.5 | 7 |
| GSM42532 | Amoxicillin treated Colon 3 17 days old | 8.5 | 10 |
| GSM42542 | Amoxicillin treated Proximal, Small Intestine 1 21 days old | 5.9 | 8 |
| GSM42544 | Amoxicillin treated Proximal, Small Intestine 2 21 days old | 5.3 | 7 |
| GSM42547 | Amoxicillin treated Proximal, Small Intestine 3 21 days old | 43 | 28 |
| GSM42535 | Amoxicillin treated Distal, Small Intestine 1 21 days old | 24.3 | 20 |
| GSM42537 | Amoxicillin treated Distal, Small Intestine 2 21 days old | 28.6 | 22 |
| GSM42540 | Amoxicillin treated Distal, Small Intestine 3 21 days old | 17.9 | 16 |
| GSM42528 | Amoxicillin treated Colon 1 21 days old | 7.6 | 9 |
| GSM42530 | Amoxicillin treated Colon 2 21 days old | 17.5 | 14 |
| GSM42533 | Amoxicillin treated Colon 3 21 days old | 30.3 | 21 |