| Sample | Title | Value | Rank |
|---|
| GSM42559 | Control Proximal, Small Intestine 1 17 days old | 23.8 | 20 |
| GSM42561 | Control Proximal, Small Intestine 2 17 days old | 45.3 | 31 |
| GSM42563 | Control Proximal, Small Intestine 3 17 days old | 21.7 | 19 |
| GSM42553 | Control Distal, Small Intestine 1 17 days old | 14.3 | 14 |
| GSM42555 | Control Distal, Small Intestine 2 17 days old | 37.5 | 28 |
| GSM42557 | Control Distal, Small Intestine 3 17 days old | 22.2 | 19 |
| GSM42548 | Control Colon 1 17 days old | 22.9 | 18 |
| GSM42550 | Control Colon 2 17 days old | 40.3 | 28 |
| GSM42560 | Control Proximal, Small Intestine 1 21 days old | 23.2 | 18 |
| GSM42562 | Control Proximal, Small Intestine 2 21 days old | 17.1 | 17 |
| GSM42564 | Control Proximal, Small Intestine 3 21 days old | 19 | 18 |
| GSM42554 | Control Distal, Small Intestine 1 21 days old | 20.7 | 18 |
| GSM42556 | Control Distal, Small Intestine 2 21 days old | 4.7 | 7 |
| GSM42558 | Control Distal, Small Intestine 3 21 days old | 34.7 | 25 |
| GSM42549 | Control Colon 1 21 days old | 21.9 | 18 |
| GSM42551 | Control Colon 2 21 days old | 34.9 | 25 |
| GSM42552 | Control Colon 3 21 days old | 26.1 | 21 |
| GSM42541 | Amoxicillin treated Proximal, Small Intestine 1 17 days old | 54.3 | 31 |
| GSM42543 | Amoxicillin treated Proximal, Small Intestine 2 17 days old | 28.3 | 21 |
| GSM42546 | Amoxicillin treated Proximal, Small Intestine 3 17 days old | 27.5 | 21 |
| GSM42534 | Amoxicillin treated Distal, Small Intestine 1 17 days old | 26.3 | 23 |
| GSM42536 | Amoxicillin treated Distal, Small Intestine 2 17 days old | 29.4 | 23 |
| GSM42539 | Amoxicillin treated Distal, Small Intestine 3 17 days old | 28 | 23 |
| GSM42527 | Amoxicillin treated Colon 1 17 days old | 20 | 16 |
| GSM42529 | Amoxicillin treated Colon 2 17 days old | 30.4 | 21 |
| GSM42532 | Amoxicillin treated Colon 3 17 days old | 46.8 | 30 |
| GSM42542 | Amoxicillin treated Proximal, Small Intestine 1 21 days old | 18.3 | 17 |
| GSM42544 | Amoxicillin treated Proximal, Small Intestine 2 21 days old | 16.2 | 16 |
| GSM42547 | Amoxicillin treated Proximal, Small Intestine 3 21 days old | 28 | 20 |
| GSM42535 | Amoxicillin treated Distal, Small Intestine 1 21 days old | 16.2 | 15 |
| GSM42537 | Amoxicillin treated Distal, Small Intestine 2 21 days old | 26.3 | 21 |
| GSM42540 | Amoxicillin treated Distal, Small Intestine 3 21 days old | 18 | 16 |
| GSM42528 | Amoxicillin treated Colon 1 21 days old | 32.1 | 23 |
| GSM42530 | Amoxicillin treated Colon 2 21 days old | 34.1 | 24 |
| GSM42533 | Amoxicillin treated Colon 3 21 days old | 52 | 31 |