| Sample | Title | Value | Rank |
|---|
| GSM42559 | Control Proximal, Small Intestine 1 17 days old | 31 | 24 |
| GSM42561 | Control Proximal, Small Intestine 2 17 days old | 33.8 | 25 |
| GSM42563 | Control Proximal, Small Intestine 3 17 days old | 45.9 | 32 |
| GSM42553 | Control Distal, Small Intestine 1 17 days old | 43.6 | 31 |
| GSM42555 | Control Distal, Small Intestine 2 17 days old | 30.5 | 24 |
| GSM42557 | Control Distal, Small Intestine 3 17 days old | 34.1 | 26 |
| GSM42548 | Control Colon 1 17 days old | 26.8 | 20 |
| GSM42550 | Control Colon 2 17 days old | 20.4 | 17 |
| GSM42560 | Control Proximal, Small Intestine 1 21 days old | 45.9 | 30 |
| GSM42562 | Control Proximal, Small Intestine 2 21 days old | 31.9 | 26 |
| GSM42564 | Control Proximal, Small Intestine 3 21 days old | 29 | 24 |
| GSM42554 | Control Distal, Small Intestine 1 21 days old | 37.6 | 27 |
| GSM42556 | Control Distal, Small Intestine 2 21 days old | 30.9 | 24 |
| GSM42558 | Control Distal, Small Intestine 3 21 days old | 39.5 | 27 |
| GSM42549 | Control Colon 1 21 days old | 25.7 | 20 |
| GSM42551 | Control Colon 2 21 days old | 36.2 | 26 |
| GSM42552 | Control Colon 3 21 days old | 30.7 | 23 |
| GSM42541 | Amoxicillin treated Proximal, Small Intestine 1 17 days old | 76.6 | 40 |
| GSM42543 | Amoxicillin treated Proximal, Small Intestine 2 17 days old | 43.6 | 28 |
| GSM42546 | Amoxicillin treated Proximal, Small Intestine 3 17 days old | 38.8 | 27 |
| GSM42534 | Amoxicillin treated Distal, Small Intestine 1 17 days old | 35.5 | 28 |
| GSM42536 | Amoxicillin treated Distal, Small Intestine 2 17 days old | 19.9 | 17 |
| GSM42539 | Amoxicillin treated Distal, Small Intestine 3 17 days old | 24.7 | 21 |
| GSM42527 | Amoxicillin treated Colon 1 17 days old | 48.1 | 29 |
| GSM42529 | Amoxicillin treated Colon 2 17 days old | 44.6 | 28 |
| GSM42532 | Amoxicillin treated Colon 3 17 days old | 33.7 | 25 |
| GSM42542 | Amoxicillin treated Proximal, Small Intestine 1 21 days old | 42.7 | 31 |
| GSM42544 | Amoxicillin treated Proximal, Small Intestine 2 21 days old | 39.8 | 30 |
| GSM42547 | Amoxicillin treated Proximal, Small Intestine 3 21 days old | 46.3 | 29 |
| GSM42535 | Amoxicillin treated Distal, Small Intestine 1 21 days old | 40 | 29 |
| GSM42537 | Amoxicillin treated Distal, Small Intestine 2 21 days old | 31.5 | 24 |
| GSM42540 | Amoxicillin treated Distal, Small Intestine 3 21 days old | 30.1 | 24 |
| GSM42528 | Amoxicillin treated Colon 1 21 days old | 43.7 | 29 |
| GSM42530 | Amoxicillin treated Colon 2 21 days old | 38.1 | 26 |
| GSM42533 | Amoxicillin treated Colon 3 21 days old | 28.4 | 20 |