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Rattus norvegicus keratin 32 (Krt32), mRNA

NCBI Reference Sequence: NM_001395759.1

FASTA Graphics 

LOCUS       NM_001395759            1708 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus keratin 32 (Krt32), mRNA.
ACCESSION   NM_001395759 NM_001008818 XM_006247394
VERSION     NM_001395759.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1708)
  AUTHORS   Hesse,M., Zimek,A., Weber,K. and Magin,T.M.
  TITLE     Comprehensive analysis of keratin gene clusters in humans and
            rodents
  JOURNAL   Eur J Cell Biol 83 (1), 19-26 (2004)
   PUBMED   15085952
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On or before Aug 6, 2021 this sequence version replaced
            NM_001008818.1, XM_006247394.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMN12840105, SAMN12840106
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-527               JAXUCZ010000010.1  85520452-85520978   c
            528-610             JAXUCZ010000010.1  85519453-85519535   c
            611-767             JAXUCZ010000010.1  85519135-85519291   c
            768-929             JAXUCZ010000010.1  85517775-85517936   c
            930-1055            JAXUCZ010000010.1  85517567-85517692   c
            1056-1276           JAXUCZ010000010.1  85516855-85517075   c
            1277-1708           JAXUCZ010000010.1  85513951-85514382   c
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..1708
                     /gene="Krt32"
                     /gene_synonym="Ka26"
                     /note="keratin 32"
                     /db_xref="GeneID:450230"
                     /db_xref="RGD:1359701"
     exon            1..527
                     /gene="Krt32"
                     /gene_synonym="Ka26"
                     /inference="alignment:Splign:2.1.0"
     CDS             45..1406
                     /gene="Krt32"
                     /gene_synonym="Ka26"
                     /note="type I hair keratin KA26; keratin 32, type I"
                     /codon_start=1
                     /product="keratin, type I cuticular Ha2"
                     /protein_id="NP_001382688.1"
                     /db_xref="GeneID:450230"
                     /db_xref="RGD:1359701"
                     /translation="MPSSCCITNTSSASLKSSARPSSVCSSNMGSRSELCLGYVCQPL
                     QCMPSICMPTTYRPASCLSKTYLSSSCQPSNRRPTGCISSSMGTYGLFCEGAFNGNEK
                     ETMQVLNDRLANYLEKVRQLEKENAELEGKIQDVYQAQVLTMCPDYQSYFQTIEELQQ
                     KVLCTKAENARMIVHIDNAKLAADDFRTKYETELALRQLVEADTNGLRRILDELTLNK
                     ADLEAQVESLKEELLCLKRNHEEEVGVLRQQLGDRLNIEVDAAPPVDLTRMLEEMRCQ
                     YETMVQTNHRDVEEWFNMQMEELNKQVATSSEQLQSYQSDIIDLRRTVNTLEIELQAQ
                     HSLRDSLENTLGETEGRFTSQLSQMQCMITNVESQLADIRCDLERQNQEYKVLLDVKA
                     RLECEIDTYRGLLESEDSKLPCNPCSTPSCQPCAPSPGVSRSVCVPRTVCVPCSPCLQ
                     TRY"
     exon            528..610
                     /gene="Krt32"
                     /gene_synonym="Ka26"
                     /inference="alignment:Splign:2.1.0"
     exon            611..767
                     /gene="Krt32"
                     /gene_synonym="Ka26"
                     /inference="alignment:Splign:2.1.0"
     exon            768..929
                     /gene="Krt32"
                     /gene_synonym="Ka26"
                     /inference="alignment:Splign:2.1.0"
     exon            930..1055
                     /gene="Krt32"
                     /gene_synonym="Ka26"
                     /inference="alignment:Splign:2.1.0"
     exon            1056..1276
                     /gene="Krt32"
                     /gene_synonym="Ka26"
                     /inference="alignment:Splign:2.1.0"
     exon            1277..1708
                     /gene="Krt32"
                     /gene_synonym="Ka26"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtagagatcc agggagctgc tgtgggggaa aggacctccc tagcatgcca tccagctgtt
       61 gcattaccaa cacctcttca gcatcactca agagctctgc acggccttcc tccgtctgtt
      121 ccagtaacat gggcagcaga tccgagctgt gcctgggtta tgtctgtcag cccctgcagt
      181 gcatgccctc catctgcatg cctaccacct acaggccagc cagttgcctt tctaagacct
      241 acttgtccag ctcctgccaa cccagcaacc gccggccaac tggttgcatc tccagctcca
      301 tgggtaccta tggcctgttc tgtgagggcg ccttcaatgg caatgagaag gagaccatgc
      361 aggtcctgaa tgatcgcctg gccaactacc tggagaaggt gaggcagctg gagaaagaga
      421 acgcagagct ggagggcaag atccaagatg tctaccaggc gcaggtgctg accatgtgtc
      481 ctgactacca gtcctacttt cagaccatcg aagagctgca gcaaaaggtt ctgtgcacta
      541 aggcagagaa tgcaaggatg attgtgcaca tcgacaatgc caagctggct gcagatgact
      601 tcagaaccaa gtatgagacc gagctggccc tgagacagct ggtagaagca gacaccaatg
      661 gcctacgcag gatcctggat gagttgaccc tgaataaagc tgacctggag gctcaagtag
      721 agtccctgaa ggaggaactt ctgtgcctca agagaaacca tgaagaggaa gttggtgtcc
      781 ttcgacaaca gctcggggac cgccttaata tcgaggtaga tgctgcacct cctgtggacc
      841 taaccaggat gctggaagag atgagatgtc agtatgagac catggtgcaa accaaccaca
      901 gggatgtgga ggaatggttc aatatgcaga tggaggagct taacaagcag gtggccacaa
      961 gctctgagca gcttcagagt taccagtcag acatcattga tctgagacga acagtcaaca
     1021 ctctggagat agaactgcag gctcagcata gcctgagaga ctctctggaa aacacgctgg
     1081 gggagacgga gggccgcttc acctcccagc tgtcccagat gcaatgcatg atcaccaatg
     1141 tggagtctca gctggctgac atccgctgtg acctggagag acagaaccaa gagtacaagg
     1201 tgttgctgga tgtcaaggcc cggctggagt gtgagattga cacgtacagg ggtctgctgg
     1261 agagcgagga cagcaagcta ccctgtaacc cttgctctac tccctcctgc cagccttgtg
     1321 caccctcccc tggggtatcc cgctctgtgt gtgtgccccg cactgtttgt gtgccttgtt
     1381 cgccctgcct acagacccgc tactgaagct tctgaacatc cctcagtgtg tgggtccctg
     1441 agggacccga gtcctgtgac ctggtacctc ttcacaccaa gcctgaccac aatcctgaga
     1501 ccaagaaaag agtgtggcca gcctagctgg ccctgaccag aaccaggaac tggacactag
     1561 caacgtgttc tgatgttaca ttgcttcaac gctacctcct ctgtttccct gggcagaagg
     1621 ttctctttgg tgccgtttct ggttgtctct gctttctcag agtgcacggg tttttggcta
     1681 aactgcaaat aaagcttaat tcagtggc
//
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