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PREDICTED: Erinaceus europaeus extended synaptotagmin 2 (ESYT2), transcript variant X2, mRNA

NCBI Reference Sequence: XM_016194534.2

FASTA Graphics 

LOCUS       XM_016194534            5096 bp    mRNA    linear   MAM 11-OCT-2023
DEFINITION  PREDICTED: Erinaceus europaeus extended synaptotagmin 2 (ESYT2),
            transcript variant X2, mRNA.
ACCESSION   XM_016194534
VERSION     XM_016194534.2
DBLINK      BioProject: PRJNA986567
KEYWORDS    RefSeq.
SOURCE      Erinaceus europaeus (western European hedgehog)
  ORGANISM  Erinaceus europaeus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae;
            Erinaceinae; Erinaceus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_080169) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 11, 2023 this sequence version replaced XM_016194534.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_950295315.1-RS_2023_10
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 10/04/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5096
                     /organism="Erinaceus europaeus"
                     /mol_type="mRNA"
                     /db_xref="taxon:9365"
                     /chromosome="8"
     gene            1..5096
                     /gene="ESYT2"
                     /note="extended synaptotagmin 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:103126670"
     CDS             62..2659
                     /gene="ESYT2"
                     /codon_start=1
                     /product="extended synaptotagmin-2 isoform X2"
                     /protein_id="XP_016050020.2"
                     /db_xref="GeneID:103126670"
                     /translation="MSGAGGGGPEAGAEAGPAALRADVAGLLAQLARSLALLLPVYAL
                     GYLGLSFSWLLLALGLLACCRRRQSLRASRLGRALALLDAPEPDAAAATPGLRACDLP
                     AWVHFPDTERAEWLNKTVKHMWPFICQFIEKLFRETIEPAVRGANAYLNTFSFTKVDV
                     GQQPLRINGVKVYTENVDKRQIILDLQISFVGNCEIDLEIKRYFCRAGVQSIQIHGTM
                     RVILEPLIGDMPLVGALSIFFLRKPLLEINWTGLTNLLDIPGLNGLSDSIILDIISNY
                     LVLPNRVTVPLVSEVQIAQLRFPVPKGVLRIHFLEAQDLQGKDTYLKGLVKGKSDPYG
                     VIRVGNQIFQSKVIKENLCPKWNEVHEALVYEHPGQELEIELFDEDPDKDDFLGSLMI
                     DLTEVEKERLLDEWFTLDEVPRGKLHLKLEWLTLVPHAAHLDQVLMDIRADKDQANDG
                     LSSSLLILYLDSARNLPSNPLEFNPDVLEKTAVQKALKSGKKISSNPNPQVQMSVGHK
                     AQESKIRYKTNEPVWEEHFTFFIHNPKRQDLEVEVRDEQHQCSLGSLTVPLSQLLSSE
                     DMTLSQRFQLSNSGPNSSLKMKLALKVLHLEKPERTPDHQHSAQVKRPSIPKEGRRVS
                     VRSQTAASPGVTSSSTAPSTPVPGGGQRPGLDEGAPPTEPSPQGPQDLGRSSSSLQVS
                     SATYSPSHPSLKEPTPSIASDISLPIATQELRQRLRQLENGTTLGQSPLGQIQLTIRH
                     SSQRNKLVVVVHACRNLIAFSEDGSDPYVRMYLLPDKRRSGRRKTHVSKKNLNPVFDQ
                     SFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVTLASEELAKGWTQWYDLTE
                     DGTRPQVVT"
     polyA_site      5096
                     /gene="ESYT2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ggcgccgctg ggctgaggcg ccgctgggcc gaggcgcggg ccggagcggc gcggcgcggc
       61 catgagcggc gcaggcggcg ggggcccaga ggcgggcgcg gaggccgggc cggcggcgct
      121 gcgcgcggac gtggcggggc tgctggcgca gctggcgcgc agcctggcgc tgctgctgcc
      181 cgtgtacgcg ctgggctacc tgggcctgag cttcagctgg ctgctgctgg ccctcgggct
      241 gctcgcctgc tgccgccgcc gccagagcct ccgcgcctcc cgcctgggcc gcgcgctcgc
      301 gctgctggac gctccggagc cggacgccgc ggccgccacc ccggggctgc gcgcctgcga
      361 cctgccggcc tgggttcact ttccagacac ggaaagggca gagtggctaa ataagaccgt
      421 gaagcacatg tggcccttca tttgccagtt catagagaag ctgttccgag agaccatcga
      481 gcctgccgtc cggggtgcaa acgcctacct caacaccttc agcttcacca aggtggacgt
      541 gggccagcag ccccttagga tcaatggtgt caaggtctat actgaaaacg tggacaaaag
      601 acaaattatt ttggaccttc agattagctt tgtaggaaac tgtgagatcg acttggagat
      661 aaagcggtat ttctgcagag ctggtgtgca gagcatccag atccatggaa ctatgcgggt
      721 gatcctggag ccgctgatcg gagacatgcc tttggtgggg gctctgtcca tcttcttcct
      781 caggaagcct cttttagaaa ttaactggac aggactgacc aaccttctcg acatccctgg
      841 gctgaatggc ctgtcagatt ccatcatcct ggacatcata tcgaactacc tggtgcttcc
      901 caaccgagtc acggtccctc tggtcagcga ggtccagata gcccagctgc gctttcctgt
      961 gccaaaggga gttctgagga tccattttct tgaagctcag gaccttcagg gtaaagacac
     1021 ttaccttaag ggccttgtca agggaaagtc agacccctat ggagtcattc gagttggcaa
     1081 ccaaatcttc caaagcaagg tcatcaaaga gaacctttgt ccaaagtgga acgaggtgca
     1141 tgaggcttta gtctacgagc accccgggca ggagctggag atcgagcttt tcgacgaaga
     1201 cccggacaag gatgactttc ttgggagtct tatgattgat ctcactgaag ttgaaaagga
     1261 gcgcctcttg gatgaatggt tcaccctgga cgaggttccc cgagggaagc tgcacctgaa
     1321 gctggagtgg ctgaccctgg tgcctcacgc cgcccacctg gaccaggtgc tgatggacat
     1381 cagagctgac aaggaccagg ctaatgatgg tctctcctcc tccctcctga ttctgtatct
     1441 ggattcagcg cggaaccttc cgagtaaccc tttagaattt aaccctgatg tgttggagaa
     1501 gactgcagtt cagaaagctt taaagtcggg gaagaaaata agcagcaacc caaaccctca
     1561 ggtccagatg tccgtcgggc acaaggctca ggagagcaag atccggtaca agactaacga
     1621 gcctgtgtgg gaggagcact tcaccttctt catccacaac cccaagcgcc aggacctcga
     1681 ggtggaggtc agagacgaac agcaccagtg ctccctgggc agcctgacgg tcccactcag
     1741 ccagctgctg tccagcgagg acatgaccct cagccagcgt ttccagctca gcaactcggg
     1801 ccccaacagc tccctgaaga tgaagctggc cctcaaggtc ctccacctgg agaagccaga
     1861 gaggacccca gaccaccagc actcggctca agtgaagcgg ccctccatcc ccaaagaggg
     1921 caggagagtc tctgttcgct cccagacagc tgcgtcccct ggtgtgacca gcagcagcac
     1981 agccccatcc acacctgtcc ccgggggagg ccagaggcca ggcctggacg agggggcccc
     2041 gcccacagag cccagccccc aggggcctca ggacctgggc aggagctcct ccagcctgca
     2101 ggtcagctct gccacctact ctcccagcca cccatccctc aaggagccca cgccaagcat
     2161 cgcctccgac atctcactgc ccatcgccac gcaggagtta cggcagaggc tgcggcagct
     2221 ggagaacggg acgaccctgg gccagtcccc tctgggccag atccaactga ccatccggca
     2281 cagctcacag aggaacaagc tggtggtggt ggtgcacgcc tgcaggaatc tgattgcttt
     2341 ctcggaagac ggctcggatc cctatgtccg catgtacctg cttccagaca agaggaggtc
     2401 ggggaggagg aagacacatg tgtccaagaa gaacctgaac cccgtgtttg atcagagctt
     2461 tgacttcagc gtctccttgc ctgaggtgca gagaagaacc ctggatgtgg ctgtgaagaa
     2521 cagcggcggc ttcctgtcca aagacaaagg cctcctgggc aaagtgttag tcaccctggc
     2581 ctcagaagaa cttgccaaag gctggaccca gtggtatgac ctgactgaag acgggacccg
     2641 gccacaggtg gtgacataac tgccctggcg tggagagccc gggacactcc tcagacaccc
     2701 actattttta taccttctgt gctgagttat aatagccaaa tagttttata aacatggggc
     2761 tttggggcgg tttgggccaa tattgtcatt aaattttgta tgttaaagtt gctccagtat
     2821 ttcaccactt cctgctgact ggacagcagg gtggcagtga gcggctgggc tggagctcct
     2881 tctgtgcaga agccgccact gtgcgttctg ttattgcctt gtttgtaaat cactgaggta
     2941 cactctgcct tgtaaataga ctctattttt tataatctct atgctgatct gaattcagaa
     3001 gaaaatgaat cgagaaatat atatatgttt attttcttct aaagcttatt aagttcatat
     3061 cagacagttc tgtctttgca gaataatgtc ctgtgaccta tttggtagtg tttcttttaa
     3121 aaagaaaaag gctaaaagta tattgcagtc catactgaaa caaaacattt gacgaatgat
     3181 ctcataaagt tatcctgctg cgaagtgctc gtgaggggaa acactggggt cctctagagt
     3241 agtctgcact gtccagaggc ttgtcaaggc tccgactacg gagtggacta atgtgggatt
     3301 tcctacatga agtgaaatgt cttaactttt agttgcttgt caggactgtt cgtgaagtag
     3361 tgcacggata cacggtaaga ctcttcctgg ggccggtgca ggcaacctgc catgtcagcc
     3421 cctaggctga gggacagtgg tcactgctcg attcttctca gtccgctgtg gacagcaggc
     3481 tcatgccgtc ttcaggacca ggagccagac taggagagct ggcaggtgac tttagccagt
     3541 ggcctgttca gcactgtgag tgtgaccgca gcacagggta ggtggccagg ctggccctca
     3601 cctctctgcc tgtctacaca ggccccagac atccaaaggg ccagcatggc cagcgagcag
     3661 catttcctgg gcctctcaca tcacgcctcc actgtcctct gtgtggggct gttgttacac
     3721 agttcatatc tcacagtagt ctttatttta ggtttatgga agcatgttta tacacacagg
     3781 attcccagac ctcttggcag cggggctgca gggctgtgcc tgctcataaa gcaggtgcat
     3841 gggtgtagat gttttctgtg ttctgggtgg cagggtccag gggcctcctg aagtcatgga
     3901 acattctaga atgggtacag caggccttct gtgtgctgag cagtgtgctg caggtgactt
     3961 ccgtggcctt caagacatcc tgcggattcc ctcctggacc ctgggcctcc agcttgtgtg
     4021 gccagtggac cgaagtgcct accgtgggcg cacacctcct gcctgcatgc ccctgcctcc
     4081 agccacacgc agtccacact cggagcccgg ttcgccagtg gcggcgtctg cagctcacca
     4141 cacgctccgc tcggcagagc ccagtttgac cttcctgcgt cctgcttggg aagcggcctc
     4201 ggtgccactg ttcctgcagg aggagagttc tacacccctg ggcttgtgta cacaaggcct
     4261 cgctggaccc tggcggtgag ggggtagtgg gtggtcactt gctgagtccc gtgcctgccc
     4321 ttgatgtctg ctgagggacg tctgccatca cccctagacc aagtgattgg cggcaaattc
     4381 ctagacacgt gttttcagcc catcctgaac ctgttggtac atgtcactgg actgaatgct
     4441 ttaaacggtc agcagagtcc atacaatgga agctacaata cccaaagaaa accactgagc
     4501 agcccacact gctcctggtg ggtgccagcg ggctggaggg agaggcctgg ctcccagctg
     4561 tcctcacagg agacacctca catcctaggt gccctccaag gcctggcacc ccagcctgac
     4621 catagggaac accgatttcc agctcttggt tatgcttcac aaggaaaggg ggctccacct
     4681 tgccaacatc caagaaaccg gctgtgtgat aggattgggg ttgtctgtac acatagttgt
     4741 tggtttgtcc tgtgccttaa agtctgagag ggagtgggga ggaagatagg aaggaaggac
     4801 agacagacag agctgctgac ttcaggtccc agactcagat ggaagcagcc tctgccctct
     4861 gtgcaccagg atgcagctct gtggttgcgt cctgcggggc tcctcctcct gccagccaca
     4921 gggtgaccct tccggagccc tcggccgcac acagagtggg tgacgctgtg ggactggatc
     4981 ccgccggcca ccactgcaca tggagaagca gcgggtcttc cagaatgtcc ttcatgttct
     5041 gctcattcta cacaacagtg catgtattta ttcaataaag cttttatgtc agctca
//
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