U.S. flag

An official website of the United States government

PREDICTED: Erinaceus europaeus dynein 2 intermediate chain 1 (DYNC2I1), transcript variant X9, mRNA

NCBI Reference Sequence: XM_060196884.1

FASTA Graphics 

LOCUS       XM_060196884            2635 bp    mRNA    linear   MAM 11-OCT-2023
DEFINITION  PREDICTED: Erinaceus europaeus dynein 2 intermediate chain 1
            (DYNC2I1), transcript variant X9, mRNA.
ACCESSION   XM_060196884
VERSION     XM_060196884.1
DBLINK      BioProject: PRJNA986567
KEYWORDS    RefSeq.
SOURCE      Erinaceus europaeus (western European hedgehog)
  ORGANISM  Erinaceus europaeus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae;
            Erinaceinae; Erinaceus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_080169) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_950295315.1-RS_2023_10
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 10/04/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2635
                     /organism="Erinaceus europaeus"
                     /mol_type="mRNA"
                     /db_xref="taxon:9365"
                     /chromosome="8"
     gene            1..2635
                     /gene="DYNC2I1"
                     /note="dynein 2 intermediate chain 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:103126669"
     CDS             161..2575
                     /gene="DYNC2I1"
                     /codon_start=1
                     /product="cytoplasmic dynein 2 intermediate chain 1
                     isoform X9"
                     /protein_id="XP_060052867.1"
                     /db_xref="GeneID:103126669"
                     /translation="MTALREGTRRERGDTGSGRTESTEVVVQTPGEKGMAASEDLWRP
                     ESVGRCDGRDRNLTRKEAEKENVDLETAGADGYAGADGYAGADGYAGADGYTGADGYT
                     GADGYTGTDGYAASFEDDFEDYEDDFEVCDGDDDTSIREPEPREHAEELPPARRKEIR
                     EIQRAIHAENERIGQFTARLLRTQGCPEPEGEPRAGFSCSDGSRASSRTPVCGIFVDF
                     ATASTRQRSRTQALKQKTRSTKLLRLIDLDFSFTFSFLDLPPVNEYDMYIRSFGKKNT
                     RQAYVQHNEDSVERDVQTEPVESREVWTQHPGEGSAVSGGGETRDPADASAAPKVDTP
                     RLSAFLRAACQVVAVLLEEDRMAALPSRSPGPQDQSLPFSGSVVALNTSLAFLQDRKV
                     SGLHASPLQRQMVVSVHGLPARPFRHALDSRHVLCVWDIWQPSGPQKVLTCESQVTSC
                     CFSPCKAFLLFAGTAHGSVVLWDLREDSRLHRYLTLRDCPWAFRTPTFSTDGTLTAVS
                     HHSPVQAIEPVSASVYRRQSFTLSPFATQEEMSGLSFHIASLDESGVLNIWVVVELPK
                     ADFAGSISDLGLIPGGRIKLVHSAAVLLSDSLSWKGFECWGSLQTLTVKFLPSDPNHF
                     VVGTDMGLVSHGTRQGLRVSPRVFKPQQCGARPLQVTAIDFSAFGEPLFLAGCSDGSV
                     RLHWLTFERPLLQWDGSTGGRAVTSLQWAPTRPAVFVVQDDASCVYLWDLLQNDLGPV
                     ARQFVAPDRLVAMALVGDPESPGGGFLGLVLARASGHLDLQLLHPQWASPEARELERL
                     QQLLRG"
     polyA_site      2635
                     /gene="DYNC2I1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cgggagcgtg aggccgactc gacccacggc cgggggaagg acagggagcg gagagctcgc
       61 aaggaggagt cccggcccct ggctgcccac cacggcccgc tggagcgcac agagcacagg
      121 ggcacagcag gtaaagtgag actcgaggag cagaggcgag atgacggctc tgagagaggg
      181 gacgaggaga gagagaggag ataccgggag cggaagaacg gagagcacag aagtcgtggt
      241 gcaaactcca ggagagaaag gcatggcagc cagtgaggac ttgtggcgtc cagagagtgt
      301 gggaaggtgc gatggaagag acagaaacct gacgaggaag gaagctgaga aggaaaatgt
      361 tgacttggaa actgctggcg ccgacgggta cgctggtgcc gacgggtacg ctggtgctga
      421 cgggtacgct ggtgctgacg ggtacactgg cgctgatggg tacactggcg ccgacgggta
      481 cactggcacc gacgggtatg cagcgagctt tgaagacgac tttgaggact acgaagatga
      541 ctttgaggtc tgtgatgggg acgatgacac cagcatcagg gagccagagc ccagagaaca
      601 tgctgaagag ctcccgccag cccgcaggaa ggagatccgg gagatccaga gagccatcca
      661 tgcggagaac gagaggatcg gccagttcac cgccaggctg ctgcggacgc aggggtgccc
      721 cgagccagag ggggagccaa gggcaggctt ctcctgctca gatggcagca gggcctcctc
      781 ccggaccccc gtctgcggca tctttgtgga cttcgcaaca gcctccaccc gccagaggag
      841 tcgcacacag gccctcaagc aaaagacacg aagcacaaaa cttctccgtc tcatcgacct
      901 ggatttctcc tttacattct ccttcctgga cctgccaccc gtgaatgagt atgacatgta
      961 catccgcagc tttgggaaga agaacaccag gcaggcctac gtgcagcaca atgaagacag
     1021 tgtggagaga gacgtgcaga cggagccggt cgagagccgg gaggtgtgga cccagcaccc
     1081 cggcgagggc tctgcggtgt ctgggggtgg cgagacccga gatcctgcag atgcctcagc
     1141 tgctccaaag gtggacacgc cacggctgtc ggccttcctc cgcgctgcct gccaggtggt
     1201 cgcagttctg ctggaggagg accgcatggc agcactgccc agccggagcc cggggccgca
     1261 ggaccagtcg ttgcctttca gcgggagtgt ggtggccttg aataccagcc tggccttcct
     1321 gcaggaccgg aaggtgagtg gtctgcacgc ctcgcccctg cagaggcaga tggtggtgtc
     1381 tgtgcacggc cttcctgctc ggccgttcag acacgctttg gacagcagac acgtgctgtg
     1441 tgtgtgggac atctggcagc cctcgggacc ccagaaggtc ctgacctgtg agtcacaggt
     1501 cacgagctgc tgctttagcc cctgcaaggc cttcctgctg tttgcgggca cggcacacgg
     1561 ctctgtggtg ctgtgggacc tcagggagga ctcccggctg caccggtacc tgacgctcag
     1621 agactgccct tgggctttcc gcacgcccac cttctccact gacggcaccc ttacagcagt
     1681 cagccaccac agccccgtgc aggccatcga gcccgtctcc gcgtctgtgt acagaagaca
     1741 gagtttcacg ctgtcaccct ttgctactca ggaagagatg tctggcctgt ccttccacat
     1801 tgcatctctg gatgagagtg gggtcctcaa catatgggtc gttgtggagt taccaaaggc
     1861 agactttgcg ggttcaatca gcgatttagg tctgattccc ggagggagga tcaagttggt
     1921 gcacagtgca gccgtcctgc tgagtgacag cctctcttgg aaagggtttg agtgctgggg
     1981 gtccctgcag acgctgactg tcaagttcct gccctcggac cccaaccact ttgttgtcgg
     2041 cacagatatg ggtctggtca gccatggcac aagacagggc ctcagagtgt ctccccgggt
     2101 cttcaagcca cagcagtgtg gggcccggcc cctgcaggtc acagccattg acttttcggc
     2161 ttttggggag ccgctgttcc tggctggctg ttctgacggg agtgtgcggc tgcactggct
     2221 gacgtttgag cgtcccctcc tgcagtggga tggcagcaca ggtggccgag cggtcaccag
     2281 cctgcagtgg gcccccacac ggccagcggt gtttgtggtc caggatgatg cctcctgtgt
     2341 ctacctctgg gaccttttgc agaatgacct aggccccgtg gccaggcagt ttgtggcccc
     2401 tgacaggctg gtggccatgg cactggtggg cgaccccgag agtccgggtg gcggcttcct
     2461 gggcctggtg ctggcccgcg cttcaggcca cctggaccta cagctcctgc accctcagtg
     2521 ggcgtcccct gaggcccggg agctggagcg gctacaacag ctgctgaggg gctgatgggg
     2581 cgaggtgggg ggctggggct ggggctgggc caataaagtt gacttctaga gtcag
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.