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NCBI Reference Sequence: XM_060196884.1
FASTA Graphics
LOCUS XM_060196884 2635 bp mRNA linear MAM 11-OCT-2023 DEFINITION PREDICTED: Erinaceus europaeus dynein 2 intermediate chain 1 (DYNC2I1), transcript variant X9, mRNA. ACCESSION XM_060196884 VERSION XM_060196884.1 DBLINK BioProject: PRJNA986567 KEYWORDS RefSeq. SOURCE Erinaceus europaeus (western European hedgehog) ORGANISM Erinaceus europaeus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae; Erinaceinae; Erinaceus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_080169) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_950295315.1-RS_2023_10 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 10/04/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2635 /organism="Erinaceus europaeus" /mol_type="mRNA" /db_xref="taxon:9365" /chromosome="8" gene 1..2635 /gene="DYNC2I1" /note="dynein 2 intermediate chain 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:103126669" CDS 161..2575 /gene="DYNC2I1" /codon_start=1 /product="cytoplasmic dynein 2 intermediate chain 1 isoform X9" /protein_id="XP_060052867.1" /db_xref="GeneID:103126669" /translation="MTALREGTRRERGDTGSGRTESTEVVVQTPGEKGMAASEDLWRP ESVGRCDGRDRNLTRKEAEKENVDLETAGADGYAGADGYAGADGYAGADGYTGADGYT GADGYTGTDGYAASFEDDFEDYEDDFEVCDGDDDTSIREPEPREHAEELPPARRKEIR EIQRAIHAENERIGQFTARLLRTQGCPEPEGEPRAGFSCSDGSRASSRTPVCGIFVDF ATASTRQRSRTQALKQKTRSTKLLRLIDLDFSFTFSFLDLPPVNEYDMYIRSFGKKNT RQAYVQHNEDSVERDVQTEPVESREVWTQHPGEGSAVSGGGETRDPADASAAPKVDTP RLSAFLRAACQVVAVLLEEDRMAALPSRSPGPQDQSLPFSGSVVALNTSLAFLQDRKV SGLHASPLQRQMVVSVHGLPARPFRHALDSRHVLCVWDIWQPSGPQKVLTCESQVTSC CFSPCKAFLLFAGTAHGSVVLWDLREDSRLHRYLTLRDCPWAFRTPTFSTDGTLTAVS HHSPVQAIEPVSASVYRRQSFTLSPFATQEEMSGLSFHIASLDESGVLNIWVVVELPK ADFAGSISDLGLIPGGRIKLVHSAAVLLSDSLSWKGFECWGSLQTLTVKFLPSDPNHF VVGTDMGLVSHGTRQGLRVSPRVFKPQQCGARPLQVTAIDFSAFGEPLFLAGCSDGSV RLHWLTFERPLLQWDGSTGGRAVTSLQWAPTRPAVFVVQDDASCVYLWDLLQNDLGPV ARQFVAPDRLVAMALVGDPESPGGGFLGLVLARASGHLDLQLLHPQWASPEARELERL QQLLRG" polyA_site 2635 /gene="DYNC2I1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgggagcgtg aggccgactc gacccacggc cgggggaagg acagggagcg gagagctcgc 61 aaggaggagt cccggcccct ggctgcccac cacggcccgc tggagcgcac agagcacagg 121 ggcacagcag gtaaagtgag actcgaggag cagaggcgag atgacggctc tgagagaggg 181 gacgaggaga gagagaggag ataccgggag cggaagaacg gagagcacag aagtcgtggt 241 gcaaactcca ggagagaaag gcatggcagc cagtgaggac ttgtggcgtc cagagagtgt 301 gggaaggtgc gatggaagag acagaaacct gacgaggaag gaagctgaga aggaaaatgt 361 tgacttggaa actgctggcg ccgacgggta cgctggtgcc gacgggtacg ctggtgctga 421 cgggtacgct ggtgctgacg ggtacactgg cgctgatggg tacactggcg ccgacgggta 481 cactggcacc gacgggtatg cagcgagctt tgaagacgac tttgaggact acgaagatga 541 ctttgaggtc tgtgatgggg acgatgacac cagcatcagg gagccagagc ccagagaaca 601 tgctgaagag ctcccgccag cccgcaggaa ggagatccgg gagatccaga gagccatcca 661 tgcggagaac gagaggatcg gccagttcac cgccaggctg ctgcggacgc aggggtgccc 721 cgagccagag ggggagccaa gggcaggctt ctcctgctca gatggcagca gggcctcctc 781 ccggaccccc gtctgcggca tctttgtgga cttcgcaaca gcctccaccc gccagaggag 841 tcgcacacag gccctcaagc aaaagacacg aagcacaaaa cttctccgtc tcatcgacct 901 ggatttctcc tttacattct ccttcctgga cctgccaccc gtgaatgagt atgacatgta 961 catccgcagc tttgggaaga agaacaccag gcaggcctac gtgcagcaca atgaagacag 1021 tgtggagaga gacgtgcaga cggagccggt cgagagccgg gaggtgtgga cccagcaccc 1081 cggcgagggc tctgcggtgt ctgggggtgg cgagacccga gatcctgcag atgcctcagc 1141 tgctccaaag gtggacacgc cacggctgtc ggccttcctc cgcgctgcct gccaggtggt 1201 cgcagttctg ctggaggagg accgcatggc agcactgccc agccggagcc cggggccgca 1261 ggaccagtcg ttgcctttca gcgggagtgt ggtggccttg aataccagcc tggccttcct 1321 gcaggaccgg aaggtgagtg gtctgcacgc ctcgcccctg cagaggcaga tggtggtgtc 1381 tgtgcacggc cttcctgctc ggccgttcag acacgctttg gacagcagac acgtgctgtg 1441 tgtgtgggac atctggcagc cctcgggacc ccagaaggtc ctgacctgtg agtcacaggt 1501 cacgagctgc tgctttagcc cctgcaaggc cttcctgctg tttgcgggca cggcacacgg 1561 ctctgtggtg ctgtgggacc tcagggagga ctcccggctg caccggtacc tgacgctcag 1621 agactgccct tgggctttcc gcacgcccac cttctccact gacggcaccc ttacagcagt 1681 cagccaccac agccccgtgc aggccatcga gcccgtctcc gcgtctgtgt acagaagaca 1741 gagtttcacg ctgtcaccct ttgctactca ggaagagatg tctggcctgt ccttccacat 1801 tgcatctctg gatgagagtg gggtcctcaa catatgggtc gttgtggagt taccaaaggc 1861 agactttgcg ggttcaatca gcgatttagg tctgattccc ggagggagga tcaagttggt 1921 gcacagtgca gccgtcctgc tgagtgacag cctctcttgg aaagggtttg agtgctgggg 1981 gtccctgcag acgctgactg tcaagttcct gccctcggac cccaaccact ttgttgtcgg 2041 cacagatatg ggtctggtca gccatggcac aagacagggc ctcagagtgt ctccccgggt 2101 cttcaagcca cagcagtgtg gggcccggcc cctgcaggtc acagccattg acttttcggc 2161 ttttggggag ccgctgttcc tggctggctg ttctgacggg agtgtgcggc tgcactggct 2221 gacgtttgag cgtcccctcc tgcagtggga tggcagcaca ggtggccgag cggtcaccag 2281 cctgcagtgg gcccccacac ggccagcggt gtttgtggtc caggatgatg cctcctgtgt 2341 ctacctctgg gaccttttgc agaatgacct aggccccgtg gccaggcagt ttgtggcccc 2401 tgacaggctg gtggccatgg cactggtggg cgaccccgag agtccgggtg gcggcttcct 2461 gggcctggtg ctggcccgcg cttcaggcca cctggaccta cagctcctgc accctcagtg 2521 ggcgtcccct gaggcccggg agctggagcg gctacaacag ctgctgaggg gctgatgggg 2581 cgaggtgggg ggctggggct ggggctgggc caataaagtt gacttctaga gtcag //
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