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Rattus norvegicus Rab40c, member RAS oncogene family (Rab40c), mRNA

NCBI Reference Sequence: NM_182675.1

FASTA Graphics 

LOCUS       NM_182675                846 bp    mRNA    linear   ROD 12-JAN-2022
DEFINITION  Rattus norvegicus Rab40c, member RAS oncogene family (Rab40c),
            mRNA.
ACCESSION   NM_182675
VERSION     NM_182675.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Rodriguez-Gabin AG, Almazan G and Larocca JN.
  TITLE     Vesicle transport in oligodendrocytes: probable role of Rab40c
            protein
  JOURNAL   J Neurosci Res 76 (6), 758-770 (2004)
   PUBMED   15160388
  REMARK    GeneRIF: A novel Rab protein, Rab40c, was cloned from an
            oligodendrocyte cDNA library. Rab40c is localized in the
            perinuclear recycling compartment, suggesting its involvement in
            endocytic events such as receptor recycling.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AY190240.1.
            
            [WARNING] On Oct 29, 2022 this sequence was replaced by
            NM_182675.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY190240.1, BC128720.1 [ECO:0000332]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q12"
     gene            1..846
                     /gene="Rab40c"
                     /note="Rab40c, member RAS oncogene family"
                     /db_xref="GeneID:359728"
                     /db_xref="RGD:727914"
     CDS             1..846
                     /gene="Rab40c"
                     /note="localized in perinuclear recycling compartment"
                     /codon_start=1
                     /product="ras-related protein Rab-40C"
                     /protein_id="NP_872616.1"
                     /db_xref="GeneID:359728"
                     /db_xref="RGD:727914"
                     /translation="MGTQGSPVKSYDYLLKFLLVGDSDVGKGEILESLQDGAAESPYA
                     YSNGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSF
                     DGIDRWIKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCN
                     FNVIESFTELSRIVLMRHGMEKIWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVTI
                     KSHLKSFSMANGMNAVMMHGRSYSLASGAGGSGSKGNSLKRSKSIRPPQSPPQNCSRS
                     NCKIS"
     exon            1..142
                     /gene="Rab40c"
                     /inference="alignment:Splign:2.1.0"
     exon            143..203
                     /gene="Rab40c"
                     /inference="alignment:Splign:2.1.0"
     exon            204..264
                     /gene="Rab40c"
                     /inference="alignment:Splign:2.1.0"
     exon            265..342
                     /gene="Rab40c"
                     /inference="alignment:Splign:2.1.0"
     exon            343..565
                     /gene="Rab40c"
                     /inference="alignment:Splign:2.1.0"
     exon            566..846
                     /gene="Rab40c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgggcaccc agggcagtcc agtgaagagc tacgattacc tgctcaagtt cctgctggtg
       61 ggcgacagcg acgtgggcaa aggcgagatt ctggagagtc ttcaggacgg agcagccgaa
      121 tccccgtacg cctacagcaa cggaatagac tataagacta ccaccatcct actagatgga
      181 cggcgtgtca agctggagct atgggatact tcgggccagg gaaggttctg taccatcttc
      241 aggtcctact cgaggggtgc gcagggaatc cttctggtgt acgacatcac caaccgttgg
      301 tcctttgatg gcattgaccg gtggatcaag gagattgatg agcatgcacc tggtgttccc
      361 cggatcctgg ttggaaaccg gctgcacctc gccttcaagc ggcaagtccc aacggagcag
      421 gccagagcct acgcagagaa gaactgcatg accttctttg aagtcagccc gctgtgcaac
      481 ttcaacgtca ttgagtcctt cactgagctc tcccgcattg tgctcatgcg gcatggcatg
      541 gagaagatct ggaggcccaa tcgagttttc agcctgcagg acctctgctg ccgtgccatt
      601 gtctcctgta ctcctgtgca cctcatcgac aagctccctc tacctgtcac catcaagagc
      661 cacctcaagt ccttttccat ggccaacggc atgaatgctg tcatgatgca cggccgctcc
      721 tactccctgg caagtggggc cgggggcagt ggcagcaagg gcaacagcct taagaggtcc
      781 aagtccatcc gtccccccca gagcccacct cagaactgct ctcggagcaa ctgcaagatc
      841 tcctag
//
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