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Rattus norvegicus gene for TIS11, complete cds

GenBank: AB025017.1

FASTA Graphics 

LOCUS       AB025017                8286 bp    DNA     linear   ROD 25-DEC-2002
DEFINITION  Rattus norvegicus gene for TIS11, complete cds.
ACCESSION   AB025017
VERSION     AB025017.1
KEYWORDS    TIS11.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1
  AUTHORS   Kaneda,N., Murata,T., Niimi,Y. and Minamiyama,M.
  TITLE     Cloning and characterization of the rat TIS11 gene
  JOURNAL   Mol. Cell. Biochem. 213 (1-2), 119-126 (2000)
   PUBMED   11129950
REFERENCE   2  (bases 1 to 8286)
  AUTHORS   Kaneda,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-1999) Norio Kaneda, Meijo University, Faculty of
            Pharmacy, Department of Analytical Neurobiology; Tempaku-ku,
            Yagotoyama 150, Nagoya, Aichi 468-8503, Japan
            (E-mail:nkaneda@meijo-u.ac.jp, Tel:81-52-832-1781(ex.330),
            Fax:81-52-834-8780)
FEATURES             Location/Qualifiers
     source          1..8286
                     /organism="Rattus norvegicus"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:10116"
                     /cell_line="PC12 pheochromocytoma cells"
     regulatory      5286..5292
                     /regulatory_class="TATA_box"
     exon            5316..5398
                     /number=1
     misc_feature    5316
                     /note="transcription start site"
     gene            join(5375..5398,6069..7007)
                     /gene="TIS11"
     CDS             join(5375..5398,6069..7007)
                     /gene="TIS11"
                     /codon_start=1
                     /product="TIS11"
                     /protein_id="BAB12432.1"
                     /translation="MDLSAIYESLMSMSHDLSPDHGGTESSGGLWNINSSDSIPSGVT
                     SRLTGRSTSLVEGRSCSWVPPPPGFAPLAPRPGPELSPSPTSPTATPTTSSRYKTELC
                     RTYSESGRCRYGAKCQFAHGPGELRQANRHPKYKTELCHKFYLQGRCPYGSRCHFIHN
                     PTEDLALPGQPHVLRQSISFSGLPSGRRTSPPPPGFSGPSLSSCSFSPSSSPPPPGDL
                     PLSPSAFSAAPGTPVSRRDPTPACCPSCRRSTTPSTIWGPLGGLARSPSAHSLGSDPD
                     DYASSGSSLGGSDSPVFEAGVFGPPQPPAPPRRLPIFNRISVSE"
     intron          5399..6068
     exon            6069..7791
                     /number=2
     regulatory      7774..7779
                     /regulatory_class="polyA_signal_sequence"
     polyA_site      7791
ORIGIN      
        1 gaattccaaa catcacacgg ctgcagaaac tctgctagag cacgaggcaa atcatagtag
       61 ctttggacag tccaaagcag ccccacacct gggattaaaa caaaaattgt tatatttctg
      121 tgtttttaaa gaacccaaaa tggccactac agtgcgtcac caatcaccat attcatcatt
      181 cttgacattt cgtctcattg tgcagcccaa gctaggctcc caagtcctag gacttatagg
      241 ctttaactac acttacaaaa aacaccttga tgtcttgaga tggaagcaag aaaactaagt
      301 tcaaagccat tctgggcaac atagtaagac ctcatcttag tcaaaagaaa aaagccaagc
      361 cttcatttaa caatacctag attcccctat gattagcagt gagctatgtc ccaaagggat
      421 gcatcaaatt caccatgggt cttgtcactt gagcacccaa catacatctc cttgactaga
      481 aatagttcag ggaattagca atcttgtata taactgaaaa gagactgatc ctgtccaagg
      541 cagagcatga ccaggggctc actgtatatt gtctggagta aggtagtctg tggttcaagc
      601 aagacaagac agctgacccc tcagtgatgt catcttacca catgagggga ggtgtggcac
      661 ccgggataca aggcctaact gcttaaaacc acactctttg ctacaacatg gggcaacagg
      721 tgtgtcttcc acacacccac accgttagaa gataattggc agtttacaat cattcaaaaa
      781 catggcagct ttggagttgc tggttccaga gatggacaag atacaacatg gtacttaatc
      841 ctgcagttcc agcatcaggg aggacctata caagttgtga agtcagatgg ccacataggg
      901 agatcctgtc tccaaagagg aaaaggggca tgggtgtcta ggccattgag gtggctcaat
      961 gggtaaccac acttgctacc aagccaggtg acctaagttc aatccctcag gcttgcatgt
     1021 tggaaggaga gaactgactc acctaagttg tcctctgact gccacacaca tttttaaaag
     1081 gagtttgttg gcctacattc atcatttgag agcctgaggc aagagtatgg tttgagacca
     1141 gcctgaacaa caatgagctg tctgtgtcaa agaaactctt actgggctgg tgagagcaga
     1201 tttgaaggaa agggaattag gtctttggga tgcaccctca gcaaaattga aggaaatgca
     1261 gaacacaggc cagcccctgg caggaagagt gaagaggctt gggctagatt cagggagcac
     1321 aggggagaaa gcccagatgg accatgaagg tccttgctaa gatttgcctt ctcccagcct
     1381 tataggcaca ggggaggttg tgggggcctg tacaaaaccc caccccaggg actatgtgta
     1441 tgagatggaa accacagcca aagtaatctc agctcttgag aagtaggctt gccgcaagtt
     1501 cgaggctaac ttgcttcacc tatctacagg ctgcttgccc ccaaagaaaa agaccaactt
     1561 tgggcacatg ccccacctcc agcagagatt agcacattgg ccatcctccc acacacatgg
     1621 accctgctcc atgaccaagt accacaaaca ctaaagcaac catctaacca cgtgactacc
     1681 caaccctgta accaccattt aacccactat ctctcacccc atcaagactt tgcccatcac
     1741 aggctgactc agctctgtgg cagagcagcc tcattcactg gggacagata agattggctc
     1801 agacactcag catctaggtg cgggtgtgtg caagtctgtt ctgcccacag aagcagacac
     1861 aggagcgcca cacaatcagt aagccgcagc actccccatc acgcgcctgc agctacgtca
     1921 agcaccaaag ttcactggtt tcactgcctt atgactggtc cacagaggaa ctatgcccag
     1981 actcaggtct accacattgt caggaacagg caacctccaa gacagccaca aataagggca
     2041 cagacccaca aataacattt gtacacacag tgtaacagcg ctgagtgagc cacagaatcc
     2101 ccacatactc tacttcaagg tcctatgtgt acaatcccag cacccagaca cctgctagga
     2161 atggcacact tagcacagat cccacggtgg ctcaattaca cacagcatag gtgggggtgg
     2221 ggtggaagtt gcagttccca tgaagtccat tcaaagacag ctgcagtagt tagttgacaa
     2281 ttctccagag gccacttgca gcacatgtgg agaagtcagt gacacagaca ggtggcttca
     2341 catttattta cagaaccctg ttctatggaa aacttaagca tcagtcacag gcacgtcccc
     2401 gcacctgcgc cctcaattac ataactagga gctccccaca caacacatgc agagcaagca
     2461 cagctcccaa tcccctgggc acactacagt tggcatactg gttgtcccct ctggaacacc
     2521 ctgcctggac cacactcaca ggcaatcacg acgggcacac acgtgccgcg tgtacacggc
     2581 cccagcccgc ccactggctc tcacaccccc gcgtttcccg tccctgcttg tttttctgga
     2641 aactcagctc tgagttcacc tccccctagg ccggaagtgc ttgctatatt tttagcttct
     2701 ctggtttccg cccctttctc taccccagcc cccaacccca gagtgcacag gacgtggctg
     2761 cgtgtcccgc gagaccttag ccgtcccctt ccccaccgtc attccagagg ggattcccgc
     2821 cactgcctgg gccgcggatt ttccccgctg gctacgtggg gagcagggca ggagtcaggc
     2881 catgaacttc ctcctgggat tggggcacac aaacgggaac tggacaaaac tcgggactcc
     2941 tagatccaga gaacaggggc tggggcctag atctcttaag tcggtgggac ttggacccct
     3001 aggtcttagg gagtaaggcg gggggtgggg ggtgggatgg gttctaaagg agaataagta
     3061 gggcctggat tcttggtgct gaataaggtg atctgtgtgt ctggacaagc aaaggaacaa
     3121 gggttgagcg ccaagacacc cgatgtgggg caggaaagag ctgagtacct gaccccatat
     3181 tttagataat gacgtctcgc tttgagtcct acagcttaaa gtcttgattt tcagaggggt
     3241 tgttatgctt acacccctcc tctatctccc accccagcag tgtagcccaa taccaggctg
     3301 ccagacttta gtcccaatga ctcagcagat agaggagggg tcaggctgag tcagggatgg
     3361 caaaaggctc ccagtctcca gggaatcgaa actggaatta ctcctccatg atccagtccc
     3421 agctggcctc cgaaaacccc cggcatgccc caccccaacc ctttcttttt gcgtttggtc
     3481 ctaaaattgg ctggctcagg gatttgtaaa ctgggcggga ggcaagttct tgtgcccctc
     3541 cttcccttct tttcccgttg tcctcgagca ctgtttacaa cagactggaa ccctggttac
     3601 aagcagcagg aacccaagcg tccgggctga gcgtcctcgt cacggcttcc aggaagcccc
     3661 cttcccccgc cctaagcgag tgagtcacgg gcaagcggga ggccgcaacc gtgccacagc
     3721 agcctacggc ccgccctgct cacgggacca gcccaggaag gccccttggc cccagaaagc
     3781 gctgcaccag ggattcccca catacacaca cgcgcgcgcg cgcgcgcaca cacacacaca
     3841 cacatacaca catacacaca cacacacaca cacatacaca cacacacacc cctctcctat
     3901 gaggcaagcc agtgagaagc ctggcagaat ctccctatct cgatacaagt gcgcaacgca
     3961 ccgtgctaga acttcccggc attgtaatta cactcctggc aatgataacc cccatacaca
     4021 agaacagttt ttcactggag atatctttga aataacactt tttacttggg tgtggcagct
     4081 atttctgtaa tcctaacact acttgggtgg tggagactgg aggatcgcga gttccaggcc
     4141 tgctaaggag acccgaccta aaaacaaaac ccttacagac ctcgagagag tttaaagttt
     4201 gcttaaagac tgcttgcact acaagaaacc cattcaacgt tgaaggtggc ccatattttt
     4261 aatagaggcg agcttcctcc ctaataaaag actcaagctg ttacagcctt gagcttcgga
     4321 agcaaaacct cttaatttaa agtgcagctt gggtaaatgg gctctgtcca gccttgctag
     4381 acttggaagg gcgctgctga gcgaagtaaa gttctgagcg gtccctacct gagccaactg
     4441 tcttacaggt tctgtgcctt caggttttag tttttatttc aacttccctt ttcatccttc
     4501 tgtaaccggc ttcctcactg agatttgtgt cccaggcccc tctccctatt gtctccccac
     4561 tccgtatagg tcagaaccag gatcacaacc atatgccagt ctttgtttca tgtgtattcc
     4621 tggctgtcct ggaactcgct ctgtaaacca ggctggcctc gaactcacag agatccctct
     4681 gcttcttcct cccaagtgct gagattaaaa gtttgagcca acatctgggg cctttttact
     4741 ttttaagaca agagtctcac taagttacct aggctgccct agaacccaca atacagtcga
     4801 gccaggcctt gaagtcccag actcctgcct cagcctcccc aagtgactgg aatcacaatc
     4861 ccaaaccagc gggtccagtg tgaatgtctc tcactgtctc tttgtttttc tctcagcttc
     4921 tggccatctc tgtctctacc agcttgtttc tccccgcccc cgtctgtctc acacgcacac
     4981 gccctctcag tctctgccct tgtcaattgt ccctaagagc cctgccccca cttctgcccc
     5041 agttctcttc ccgactacct tcaacctctg aaaactagtc agacgcccca ctcccatcac
     5101 caccaaatct gtggtacaca gccctcccca ctaacctcgt gggagagggc tgtgggagag
     5161 ccaagttcag gcacattgtg catgctaacc agcagatggg cggaaggggc ctagtaccag
     5221 gccggccggg ctacgccgcg ggggcgcgtc cgggaagctc tcgtggccac gcccccgggc
     5281 cgccccataa aaggcgaaag ctcctgcggc ggtcccacag cctgacttct gcgaaccgac
     5341 tgtcggtctc ttctccatgg ccattcgcgc caccatggat ctctctgcca tctacgaggt
     5401 gagtactggt tagacagcac tctcggatcc tcgacgcacc aaacttaggc cccggacgcc
     5461 tccattcctt ctcagactag ccctaactgg ctggaagtga gagagggagc ccgtgagccc
     5521 ggcgcctcgg tctagatacc ggcgatcccc tggggacgga aagctggcgc actgctgtca
     5581 ctcgcgcagg gcggaagcgg ccccacacct gtctagtacc cttcgctgtc catggcgcgg
     5641 tttggcggcc aggcaggtgt tgaagttgag cggggagttg acccggtcag agtcctagag
     5701 agatctggcc tcctgggtca gctttggccg gcttctctaa gttgtgaaac gagcgcccga
     5761 tgggcggtct tatccgggga ggtctaaagg cccaaaattg gcgagcagcc gtggtgcttt
     5821 gatttggggg taccctctct cgatccatcg gggatactgg gctccctaga tccttctgga
     5881 ttagcttcag tcatttgtta acacccaaac ctctgtagtc aggttctccc tgaaatttgt
     5941 gagccgggtg gggctcaggc tgagaaccca caaaccggaa tgacaagctc gtgaagtgct
     6001 ttaccacagg ggcggggcgt cgtcacctta ccttttctgg tggcctaacc gaaccctatt
     6061 ctccttagag ccttatgtcg atgagccatg acctgtcacc cgaccacgga ggaactgagt
     6121 cctccggagg actttggaac ataaactcat cggactccat cccatctggg gtcacctctc
     6181 gcctgactgg ccgctccact agcctggtgg agggccgaag ctgcagctgg gtacccccac
     6241 cccctggttt cgcacccttg gctccccgcc cgggccctga gctgtcaccc tcacctactt
     6301 cgcctactgc aactcccacc acctcctctc gatacaagac tgagctctgt cggacctact
     6361 cagagagcgg gcgttgtcgc tatggggcca agtgccagtt tgcccacggc ccgggtgaac
     6421 tgcgccaagc caatcgccac cccaagtaca aaacggaact ctgccacaag ttctacctcc
     6481 agggccgctg cccctacggc tctcgatgcc acttcatcca caaccctacc gaggacctgg
     6541 ctctccctgg ccagccccat gtgctccgac aaagcatcag cttctcaggc ttgccttcag
     6601 gccgcagaac ctcaccacca cctccaggct tctctggccc ttccctgtcc tcttgctcct
     6661 tttcgccttc cagctcccca ccaccgcctg gggaccttcc actttcccct tctgccttct
     6721 ctgctgcccc tgggacccct gtgtctcgaa gagaccctac cccagcctgt tgtccctcct
     6781 gccgaaggtc tactacccct agcaccatct gggggccctt gggtggtctg gctcggagcc
     6841 catctgcaca ctctctggga tccgaccctg atgattacgc cagcagcggc agcagcctgg
     6901 gtgggtcaga ctcgcctgtc tttgaggccg gggtgtttgg gcctcctcag ccccctgcac
     6961 ccccaaggcg tcttcccatc ttcaatcgca tctctgtctc tgagtgacaa gtgcctgccc
     7021 agtgtggatc agctagatct caaagaagag ggagggaact gctcgttgct gtggggacct
     7081 ggggggactc ctctaagtcc ctcctcctgg acattccaag ttgcattaac ccattcccct
     7141 ggtgctgggc tagggcaggt ccctagtttg caaattcagt gtttgggtgg atccgttcct
     7201 agggtacctg agatgtagca tgtttgaggg gtacagttga cagttgatct tccaggtctc
     7261 aagtcttatg ttgtttctga gataggggat tattacggta ccccaggctg gctttgaact
     7321 caatataatc ctgccttagc cttttccaag ttctggggtt acaggtatgc accagcccct
     7381 cggaaactct ggtctcctgg aatcttaagt gctgtgaaga gccggctccc acaatactat
     7441 cctaattttt actagacccc gaagttcagt gtccggtggt tgtagcctct cctgagaatc
     7501 ctggtgctca aatttccctc ccaaagcaaa tagccaaagc cattgccaaa tcccttttcc
     7561 cccacgcccc tgccccaacc aatggaccct ttatttatga cgactttatt tattgtaata
     7621 agattttata gtatttatat atattgggtc gtctactccg tttttctttt tgtaatgtta
     7681 aaactgatac tgtattaagt atatactata atatattaag taatatattg ttaccgtaca
     7741 agtctatttt tgtgggtttt tttggaattt ttaaataaaa tcttgagtgt gaactgtgat
     7801 gaaatttgtt tttttccgtg gtccacagcc ttgtgatggt gggtaaactg acctccagac
     7861 cttcctgtga gcactgctgc cggggggggg ggggcgctta cctggcagga agtgacgtta
     7921 gcccggttgt tcacctgagg aggcgtggcg ggatgaggtc acccaaaagg aacaaggaga
     7981 gctagttctc ttggctaagg ggtgctccag gcctgtccct ccggctcttg acccagctcg
     8041 ggcagggaca ggatgtttcc gtccccacag ggccaaggaa ggagggaggg gtggggcggg
     8101 gcggcgagga cggaatgtgc cggaaggcga gcccgggcgg ccagggtcag gggtcacccc
     8161 aaagccggcc cctaggggac tctgaacccc gcgtagacag cctgggcgag cttgacaaga
     8221 ggacttattt tagtttaact tttttttttt ttttaaataa ggtcgacctc gagggggggc
     8281 ccggta
//
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Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the Zfp36 gene (NM_133290.3).

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