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Rattus norvegicus mRNA for pepsinogen F protein, strain SD

GenBank: AJ251687.1

FASTA Graphics 

LOCUS       AJ251687                1333 bp    mRNA    linear   ROD 15-APR-2005
DEFINITION  Rattus norvegicus mRNA for pepsinogen F protein, strain SD.
ACCESSION   AJ251687
VERSION     AJ251687.1
KEYWORDS    pepsinogen F protein.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1
  AUTHORS   Kageyama,T., Ichinose,M., Tsukada-Kato,S., Omata,M., Narita,Y.,
            Moriyama,A. and Yonezawa,S.
  TITLE     Molecular cloning of neonate/infant-specific pepsinogens from rat
            stomach mucosa and their expressional change during development
  JOURNAL   Biochem. Biophys. Res. Commun. 267 (3), 806-812 (2000)
   PUBMED   10673373
REFERENCE   2  (bases 1 to 1333)
  AUTHORS   Kageyama,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-1999) Kageyama T., Center for Human Evolutionary
            Modeling Research, Primate Research Institute, Kyoto University,
            Inuyama, 484-8506, JAPAN
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="SD"
                     /db_xref="taxon:10116"
                     /clone="pRT723"
                     /dev_stage="4-day-old infant"
     CDS             21..1184
                     /function="unknown"
                     /codon_start=1
                     /product="pepsinogen F protein"
                     /protein_id="CAB75982.1"
                     /db_xref="GOA:Q9JJX2"
                     /db_xref="HSSP:4CMS"
                     /db_xref="InterPro:IPR001461"
                     /db_xref="InterPro:IPR001969"
                     /db_xref="InterPro:IPR009007"
                     /db_xref="InterPro:IPR012848"
                     /db_xref="InterPro:IPR021109"
                     /db_xref="UniProtKB/TrEMBL:Q9JJX2"
                     /translation="MKWLWVLGLVALSECLVKIPLMKIKSMRENLRESHMLKDYLEKY
                     PRSRAHVLLEQRRNPSVTYEPMRNYLDLVYIGTISIGTPPQEFKVVLDTGSSDLWVPS
                     IYCSSPACAHHKVFNPLQSSTFLVSGRPVNVAYGSGEMSGFLAYDTVKIGDLTVVAQA
                     FGLSLEEPGRFMEHAVFDGILGLGYPNLGLQGVTPVFDNLWIQGLIPQNLFAFYLSSK
                     DEKGSVLMLGGVDPSYYHGELHWVPVSKPSYWQLAVDSISMNGEIIACDGGCQGIMDT
                     GTSLVTGPRSSILNIQNLIGAKASGDGEYFLKCDTINTLPDIVFTIDSVTYPVPASAY
                     IRKDHSHNCRSNFEESTDDPSDPELWVLGDVFLRLYFTVFDRANNRIGLASAA"
     sig_peptide     21..65
     mat_peptide     66..1181
                     /product="pepsinogen F protein"
ORIGIN      
        1 ccttagcctg ggaaaggatc atgaaatggc tttgggtcct cgggcttgtg gccctctcag
       61 agtgcttggt caaaatccct ctgatgaaga ttaagtccat gcgagaaaac ctgcgggaaa
      121 gccacatgct gaaggattac ctggagaagt accctcgcag ccgtgcccac gtgcttcttg
      181 agcagcgcag gaacccatca gtaacttatg agcctatgag gaactaccta gacctggtct
      241 acatcggcac catcagcatt ggcacgcccc ctcaggagtt caaggttgtc ttggatactg
      301 gttcttcaga cctgtgggta ccatccatct actgctccag cccagcctgc gctcatcaca
      361 aagtcttcaa ccctcttcag tcttccactt tcctggtctc aggccgacct gtgaatgttg
      421 cctatggctc aggagagatg tctggatttc ttgcctatga cactgtcaag attggagacc
      481 tcacggttgt ggcccaggca tttggcctga gcctggaaga acctggccgt ttcatggaac
      541 atgctgtctt tgatggtatc ctgggactgg gataccccaa ccttggtctt cagggagtca
      601 cacctgtctt tgacaaccta tggatacaag gcctcatccc ccagaatctc tttgccttct
      661 acttgagcag caaggatgaa aagggcagcg tgctgatgct aggtggggtg gacccctcct
      721 attaccatgg agagcttcac tgggtaccag tgtccaagcc cagctactgg cagttagctg
      781 tggacagcat ctccatgaac ggggagatca ttgcctgtga tggtggctgc caaggtatca
      841 tggatacagg gacctccttg gtgaccggcc cacgaagctc aatccttaac atccagaacc
      901 tcattggtgc caaggcttct ggtgatggcg agtacttcct caagtgtgac accatcaaca
      961 ccctacctga cattgtcttc accatcgaca gtgtgaccta cccagtgcca gccagtgcct
     1021 acatccggaa ggatcattca cacaattgcc gaagcaactt tgaagaaagc acagatgacc
     1081 cgtcagaccc tgagttgtgg gtgctggggg atgttttcct gaggctgtac ttcaccgtgt
     1141 ttgatcgggc aaataacagg attggtctgg cttctgctgc atgagtgctg ggcctccttc
     1201 agggaatggc caggcacacc cctcaacacg gaattgagta tgggtcattt catccaggaa
     1261 gctgacccca ggctaggagg agctctgcaa gaccctgttc tgtgtaagaa ataaagattg
     1321 cattcgcaaa gcc
//
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Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the Pga3 gene (NM_021753.1).

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