LOCUS BC098667 2704 bp mRNA linear ROD 17-JUL-2006
DEFINITION Rattus norvegicus RAB27A, member RAS oncogene family, mRNA (cDNA
clone MGC:112618 IMAGE:7384913), complete cds.
ACCESSION BC098667
VERSION BC098667.1
KEYWORDS MGC.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 2704)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2704)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUL-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Drs. Josef Lazar & Howard Jacob, Medical
College of Wisconsin
cDNA Library Preparation: Open Biosystems
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 225 Row: n Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 70778972.
FEATURES Location/Qualifiers
source 1..2704
/organism="Rattus norvegicus"
/mol_type="mRNA"
/db_xref="taxon:10116"
/clone="MGC:112618 IMAGE:7384913"
/tissue_type="Thymus, rat"
/clone_lib="NIH_MGC_251"
/lab_host="DH10B"
/note="Vector: pExpress1"
gene 1..2704
/gene="Rab27a"
/gene_synonym="ram"
/db_xref="GeneID:50645"
/db_xref="RGD:620918"
CDS 65..730
/gene="Rab27a"
/gene_synonym="ram"
/codon_start=1
/product="RAB27A, member RAS oncogene family"
/protein_id="AAH98667.1"
/db_xref="GeneID:50645"
/db_xref="RGD:620918"
/translation="MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGI
DFREKRVVYRANGPDGTVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLT
NEQSFLNVRNWISQLQMHAYCENPDIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYF
ETSAANGTNISQAIEMLLDLIMKRMERCVDKSWIPEGVVRSNGHTSTDQLSEEKEKGL
CGC"
ORIGIN
1 cgcaacaccg cggggacagc acccgacaga gcaccaaacc gggtaaagca gagaggcctc
61 catcatgtcg gatggagatt atgactacct catcaagttt ttggccttgg gagactctgg
121 agtggggaag accagtgtac tgtaccagta cactgatggg aagttcaact ccaaattcat
181 caccacagtg ggcattgatt tcagggaaaa gagagtggtg tacagagcga atggaccaga
241 tggaactgta ggccgaggcc agagaattca cctgcagtta tgggacacgg cggggcagga
301 gaggtttcgt agcctgacca cggcattctt cagggacgct atgggtttcc tgcttctgtt
361 cgacctgaca aacgagcaaa gtttcctcaa tgtccgaaac tggataagcc agctacagat
421 gcacgcgtac tgcgaaaacc cagatatagt gctctgcgga aataagagtg acctagaaga
481 ccagagggct gtgaaagagg aggaagccag ggaactcgca gagaagtatg gaatccccta
541 ttttgaaacc agcgctgcca atgggacaaa cataagccaa gcaattgaga tgctcctgga
601 cctgatcatg aagcggatgg agcggtgtgt ggacaaatcc tggattccag agggggtggt
661 gcggtccaat ggccatactt ctacagatca actcagtgag gagaaggaga aggggttatg
721 cggctgttga gacaccgagt gagcatggtg gcggcagtgg cggcagcagc gcctggcccc
781 tgcctgccaa atcctctgta gagaccaagc cagcatcacg tgccaagtgc tgctccttat
841 ccccagtaga actgactcaa catccaattg taactcattg caacttcata tgatttagtc
901 catgaattgg gggaactatt tcacagagcc aaaagtgtct tagagaaaaa aaaagcccat
961 ggccgcgggt cattcaggga tccaagattt cagccatgga agattgcgtg tcatgtagaa
1021 tgctgatggt cccgtcgcct gccttaacag tcaactgcct caacacagcc ctagagtctc
1081 actgaagacg ttaagatgtt tgggcaatga aaagctagca tggtctagag aatccagagt
1141 tcagaatcca taccgtagaa tatcactctc acgtgaatgc taataagtgt gtaccatgga
1201 tcaatgtctt tcagcattac cttaaactta gccttccctt tgacatgaac gtaaacagat
1261 ggcggccata tctataggct ctgagtagac cggattgact caccgtgagt ttgggggtgg
1321 gtgaagtagg gatcaagttt agtcagattg tctggctttt agccgcgggg tcatggagac
1381 cctcgagttt atccgtggtt cagcccacat ctgaacattg aagatgcatc tgctgtgtgt
1441 gcatttgtac gtatgtctgg tctggcactt caggctgtgc tttcacttgt ctgtagactg
1501 cgaatttgac ttttccatca agctttggtg gtgttggggt ttcccagttt gttttctccc
1561 ccatttgtgt aactgaagga agctcttgtt aattatacag cttgtttatt tgctatctgg
1621 agggagatca atgtctgtct ttaagcagtc acatttatat gctagtttag gagaggtgtt
1681 ttttagcctg taactttcac tgagaatttg ggcacttatg ttttttgaca gtataaagga
1741 aaccacgtgc tttgcatggt agttttcgag tggctttttt tgttgttgtt gtttttgttt
1801 tgtttttttg gggggacagg gtcttattat gtagtttctg gccagcctgg aagtcccttt
1861 gtagaccagg ctggcctcaa actcacagag atccacctgt ttcagccccc taagtgttgg
1921 gataaaaggt gtggtcatca cacctggctc tcagaagatt tttaaaaatg gaacatcgat
1981 catttattgc cattgtcctt tgaccccctc cccagacaaa atagccatgg ctactaagct
2041 ttttctgtcc ctgaaataag ggactctttg aaacaccaaa gttgtcaccg aggcctatgc
2101 atctgaatcc taaagaccgg aaacttgggg cccatcacag tcgtgccttc caatgttgct
2161 ctaagacttc agtggactgt actgcacgtc agggcacgtt tcttaattaa tgtctccttt
2221 gtaaatacaa acgtattact atgccaggtg ttggtggcgc actccttcaa tctcccgcag
2281 ttgggaggca gaggcaggca gcgagtttga agccaggctg gtcaatagag tttcaggaca
2341 gacagtgaca cagtgaaatt ctgtttcaag aatcaaagcc aatgtttgca cagtgcaggt
2401 ttctagaagg agatccattg tcggattcgc cttctgttgg ccccgcacca ggcacggatg
2461 ttaagatatg tgatagttgc ccagcgagag agcggccttg aattgttgaa atcaaacaaa
2521 actgtattct ctttgaaaat gatttaaatt tgatataaaa taactgtact tattgtcact
2581 gtatttttct atttacaaat ctgtatgaaa gcaaacgctc ttcagtgaac tttgtgccaa
2641 ttaaaccata ataataaata ataaaagagg tccagtaaaa aaaaaaaaaa aaaaaaaaaa
2701 aaaa
//