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Rattus norvegicus nuclear receptor subfamily 2, group F, member 1 (Nr2f1), mRNA

NCBI Reference Sequence: NM_031130.1

FASTA Graphics 

LOCUS       NM_031130               2514 bp    mRNA    linear   ROD 05-FEB-2018
DEFINITION  Rattus norvegicus nuclear receptor subfamily 2, group F, member 1
            (Nr2f1), mRNA.
ACCESSION   NM_031130 XM_346611
VERSION     NM_031130.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2514)
  AUTHORS   Chiang DY, Cuthbertson DW, Ruiz FR, Li N and Pereira FA.
  TITLE     A coregulatory network of NR2F1 and microRNA-140
  JOURNAL   PLoS ONE 8 (12), e83358 (2013)
   PUBMED   24349493
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2514)
  AUTHORS   Armentano M, Chou SJ, Tomassy GS, Leingartner A, O'Leary DD and
            Studer M.
  TITLE     COUP-TFI regulates the balance of cortical patterning between
            frontal/motor and sensory areas
  JOURNAL   Nat. Neurosci. 10 (10), 1277-1286 (2007)
   PUBMED   17828260
REFERENCE   3  (bases 1 to 2514)
  AUTHORS   Tripodi M, Filosa A, Armentano M and Studer M.
  TITLE     The COUP-TF nuclear receptors regulate cell migration in the
            mammalian basal forebrain
  JOURNAL   Development 131 (24), 6119-6129 (2004)
   PUBMED   15548577
REFERENCE   4  (bases 1 to 2514)
  AUTHORS   Zhang Y and Dufau ML.
  TITLE     Nuclear orphan receptors regulate transcription of the gene for the
            human luteinizing hormone receptor
  JOURNAL   J. Biol. Chem. 275 (4), 2763-2770 (2000)
   PUBMED   10644740
REFERENCE   5  (bases 1 to 2514)
  AUTHORS   Yoshikawa T, Xing GQ and Detera-Wadleigh SD.
  TITLE     Detection, simultaneous display and direct sequencing of multiple
            nuclear hormone receptor genes using bilaterally targeted RNA
            fingerprinting
  JOURNAL   Biochim. Biophys. Acta 1264 (1), 63-71 (1995)
   PUBMED   7578258
REFERENCE   6  (bases 1 to 2514)
  AUTHORS   Connor H, Nornes H and Neuman T.
  TITLE     Expression screening reveals an orphan receptor chick ovalbumin
            upstream promoter transcription factor I as a regulator of
            neurite/substrate-cell contacts and cell aggregation
  JOURNAL   J. Biol. Chem. 270 (25), 15066-15070 (1995)
   PUBMED   7797489
REFERENCE   7  (bases 1 to 2514)
  AUTHORS   Ben-Shushan E, Sharir H, Pikarsky E and Bergman Y.
  TITLE     A dynamic balance between ARP-1/COUP-TFII, EAR-3/COUP-TFI, and
            retinoic acid receptor:retinoid X receptor heterodimers regulates
            Oct-3/4 expression in embryonal carcinoma cells
  JOURNAL   Mol. Cell. Biol. 15 (2), 1034-1048 (1995)
   PUBMED   7823919
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from U10995.1.
            
            [WARNING] On Nov 25, 2020 this sequence was replaced by
            NM_031130.2.
            
            On Apr 19, 2005 this sequence version replaced XM_346611.2.
            
            Summary: acts as a transcriptional activator; inhibits neurite
            outgrowth; may regulate cell surface interactions during
            neurogenesis [RGD, Feb 2006].
            
            ##Evidence-Data-START##
            Transcript exon combination :: U10995.1 [ECO:0000332]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2514
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="W"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q11"
     gene            1..2514
                     /gene="Nr2f1"
                     /gene_synonym="COUP-TFI"
                     /note="nuclear receptor subfamily 2, group F, member 1"
                     /db_xref="GeneID:81808"
                     /db_xref="RGD:621682"
     misc_feature    19..21
                     /gene="Nr2f1"
                     /gene_synonym="COUP-TFI"
                     /note="upstream in-frame stop codon"
     CDS             475..1734
                     /gene="Nr2f1"
                     /gene_synonym="COUP-TFI"
                     /codon_start=1
                     /product="COUP transcription factor 1"
                     /protein_id="NP_112392.1"
                     /db_xref="GeneID:81808"
                     /db_xref="RGD:621682"
                     /translation="MAMVVSSWRDPQDDVAGGNPGGPNPAAQAARGGGGGEQQQAGSG
                     APHTPQTPGQPGAPATPGTAGDKGQGPPGSGQSQQHIECVVCGDKSSGKHYGQFTCEG
                     CKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPP
                     TQPNPGQYALTNGDPLNGHCYLSGYISLLLRAEPYPTSRYGSQCMQPNNIMGIENICE
                     LAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAVLAAA
                     GLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDA
                     AHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGK
                     TPIETLIRDMLLSGSSFNWPYMSIQCS"
ORIGIN      
        1 cgccgcctgt gccatttctg attttgcaac ttggggaaga agaaaaaagc gagagaaggg
       61 agctcgctcg ccggggggtg gggagggggg agagagagcg cggccccccc aggaacggag
      121 cgcggggggg agcgggcgag gggagcaggg gtgttggggg ggagcctgag agcctggggg
      181 ggctgcaaaa agagagaaag aaaacagcag gaaccacaac aaaactccag cagggcgggc
      241 gggctccgca gcagcagcgg ggcggccgag gcagtacggc agcggcggcg gcggcggagg
      301 cagcggccgg tgtccggctc gggctcggct cctgcgaccc cggggcgccc ggcgggcccc
      361 ccgccccctc cccctccccc cttccccttc cccttcccct cccagcgcgc ccgcgcgccc
      421 cgccgccctc ggcgagcagc tcggctcccc ccagcgctcc ccgggcccaa agatatggca
      481 atggtagtta gcagctggcg agatccgcag gacgacgtgg ccgggggcaa ccccggcggc
      541 cccaaccccg cagcgcaggc agcccgcggc ggcggcggcg gcgagcaaca gcaggcgggc
      601 tccggcgcgc cgcacacgcc gcagaccccg ggccagcccg gagcgcccgc cacccccggc
      661 acggcagggg acaagggcca gggcccgccc ggttcaggcc agagccagca gcacatcgag
      721 tgcgtggtgt gcggggacaa gtcgagcggc aagcactacg gccaattcac ctgcgagggc
      781 tgcaaaagtt tcttcaagag gagcgtccgc aggaacttaa cttacacatg ccgtgccaac
      841 aggaactgtc ccatcgacca gcaccaccgc aaccagtgcc aatactgccg cctcaagaag
      901 tgcctcaaag tgggcatgag gcgggaagcg gttcagcgag gaagaatgcc tccaacccag
      961 cccaatccag gccagtacgc actcacaaac ggggatcccc tcaatggcca ctgctacctg
     1021 tccggctaca tctccctgct gctgcgagca gagccctacc ccacgtcgcg ttatggcagc
     1081 cagtgcatgc agcccaacaa catcatgggc atcgagaaca tctgcgagct ggcagcccgc
     1141 ctcctcttca gcgccgtcga gtgggcccgc aacatcccgt tcttcccgga tctgcagatc
     1201 accgaccagg tgtccctcct acgcctcacc tggagcgagc tgttcgtgct caacgcggcc
     1261 cagtgctcca tgcccctgca cgtggccgtg ctggcagcag ccggcctaca cgcctcgccc
     1321 atgtccgcgg accgggtcgt ggccttcatg gaccacatcc gcatctttca ggaacaggtg
     1381 gagaagctca aggcgctgca cgtcgactct gccgagtaca gctgcctcaa agccatcgtg
     1441 ctgttcacgt cagatgcttg tggcctgtcg gatgctgcac acatcgaaag cctgcaggag
     1501 aaatcgcagt gtgcactgga ggaatacgtg aggagccagt accccaacca gcccagccgc
     1561 tttggcaaac tgctgctgcg attgccctct cttcgcacag tgtcctcttc tgtcatagag
     1621 cagctcttct tcgtccgttt ggtaggtaaa acccccatcg aaactctcat ccgagacatg
     1681 ttgttgtcag ggagcagttt caactggcct tacatgtcca tccagtgctc ctagaccttg
     1741 ggtgtttccc acctgcccct gcacccccta acgccctaga gactaagcgg actcaccctg
     1801 taccaaggac tcaaaagcct ttggggatgc tggtatcagg gcaggcaggg cggaggggag
     1861 gagggccgag gagaggccca ctctgcagaa atacaatccg agctacaaag catgggaaaa
     1921 agagactctt ttaggatcag atctgtgagc acgttggcga ggaaaaacaa aacaaacaaa
     1981 aaaaagaacc ttgtgtctgt ctggtgaaaa aaagaaaaac aaattggaag agaggaccat
     2041 gagaatttta ataaaacaga aggaaactaa tggaccttcc aggatttatt gtggacggat
     2101 gtggatatat tctgtacagg aacaacacat atggaagtgg actgaagcct atgtagaaac
     2161 acacacacac tgaacattgt tattcatttt gtaaaatact agtctttatt ttgcattttt
     2221 cgtaaaattt aaacatcgta tgcgcataaa caaaaatgaa caagaattag gcggaaataa
     2281 cattttccaa ataattataa aatataaata acattttcca aataattata aaatatttgt
     2341 cctgtgtcta tgtatctata tctgttttgt atttttttct ggttccaaac cagatttcct
     2401 gtgattctat actaataatt tttgatataa ccctttgctt cttataatga gtgcgatata
     2461 tgttgtcgag gctgttcttc aagaattaaa attgaagtga aaatttaaac aaaa
//
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