Warning: The NCBI web site requires JavaScript to function. more...
An official website of the United States government
The .gov means it's official. Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you're on a federal government site.
The site is secure. The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.
Download features.
Download gene features.
NCBI Reference Sequence: XM_006253850.3
FASTA Graphics
LOCUS XM_006253850 1932 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus solute carrier family 35 member B3 (Slc35b3), transcript variant X3, mRNA. ACCESSION XM_006253850 VERSION XM_006253850.3 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_086035) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 22, 2024 this sequence version replaced XM_006253850.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_036323735.1-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/09/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1932 /organism="Rattus norvegicus" /mol_type="mRNA" /strain="BN/NHsdMcwi" /bio_material="RGD 61498" /db_xref="taxon:10116" /chromosome="17" /sex="male" /tissue_type="kidney, spleen, liver" /geo_loc_name="USA: Wisconsin, Milwaukee" /lat_lon="43.05 N 88.04 W" /collected_by="Rebecca Schilling, Melinda Dwinell" gene 1..1932 /gene="Slc35b3" /note="solute carrier family 35 member B3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 40 long SRA reads, 12 Proteins" /db_xref="GeneID:306866" /db_xref="RGD:1307183" CDS 220..1329 /gene="Slc35b3" /codon_start=1 /product="adenosine 3'-phospho 5'-phosphosulfate transporter 2 isoform X2" /protein_id="XP_006253912.1" /db_xref="GeneID:306866" /db_xref="RGD:1307183" /translation="MDLKFNNSRKYVSITVPSKTQTMSPHIKSVEDVVVLGVNLSRFK KLTQFLICVAGVFVFYLIYGYLQELIFSMEGFKPYGWYLTLVQFAFYSVFGLIELQLT QDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLGGVFIQG KRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGNVQEKAM KLHNASNSEMVLYSYSIGFVYILLGLSCTSGLGPALAFCSKNPVRTYGYAFLFSLTGY FGISFVLALIKIFGALLAVTVTTGRKAMTIVLSFLFFAKPFTFQYIWSGLLVVLGIFL NVYSKNMDKIRLPSVYSVIKKAMDMKKSRTLAQTV" polyA_site 1932 /gene="Slc35b3" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gagaccttcc gggaaggtgg cggccgaggt ggcggtcgag agagcaggac cggagacagg 61 tggatgcgga ggaggtgaca gcggctgagc tgggaggggg ccttgccgcg cggtcaggcg 121 tcgttaggca gcactcgggc ccagccagca agacggggcc cagcagtgga gaagagcaga 181 gacaaggttg caggccttga atgcggcaaa gcagaaacca tggacctcaa gttcaacaac 241 tccaggaagt atgtctccat cactgtgccc tccaaaaccc agacaatgtc gccacacatc 301 aagtcggttg aggacgtcgt ggtgctgggc gtgaacctca gcaggtttaa gaagctcaca 361 cagtttctca tatgtgtggc tggagttttt gtgttttacc taatttatgg atacttacag 421 gagttgatat tttcaatgga aggctttaag ccttacggct ggtaccttac tttagtacag 481 tttgcatttt actctgtatt tggcctaata gaactccagc tcactcagga caaaaggaga 541 agaataccag gaaaaaccta catgataata gcttttctaa ctgtgggtac tatgggctta 601 tcaaacactt ccttgggcta cctgaattac ccaacccaag tcatcttcaa gtgctgcaaa 661 ctgattcctg ttatgctagg aggagttttt attcaaggaa agaggtacaa ccttgcagac 721 gtgtccgctg cagtgtgcat gagccttggc ctgatctggt ttacccttgc tgacagcaca 781 attgcaccaa actttaatct gacaggtgtg atgcttatct ccctggcact gtgtgcagat 841 gctgtcattg ggaacgttca ggagaaagct atgaaactgc acaatgcttc caactccgag 901 atggttttgt attcgtactc aatcggtttt gtgtacattc tgttgggatt gtcatgcacc 961 agtggactgg gtcctgcact ggcattttgt tcaaagaacc ctgttcggac ttatggctat 1021 gccttcctgt tttccctcac tggttacttt ggaatctcct ttgttctggc cctcattaaa 1081 atctttggtg ctcttctggc tgtaacagtg acaacaggac gaaaagcaat gaccatcgtc 1141 ctgtcctttc tgttctttgc taagccattc acatttcagt atatatggtc tggcttgcta 1201 gttgtccttg gcatatttct gaatgtttac agcaaaaata tggataaaat aagattgccc 1261 tcggtgtaca gtgtgataaa gaaagccatg gacatgaaaa agtcaagaac gttggcacag 1321 actgtgtagg aactgtgttc gcctatgtaa aataaaagtc tgagggaaca atcattaatc 1381 aactcacttt ccaaaggctt gtggtaaaac caaaggatct gaaggctgct gtcgtctgag 1441 caggtcgtac tctcggtggt tcctcggcat ctgcctctac agaacacaca cttttgatca 1501 gctccaaaac gatcaagagc ccacacctag gacattttgc aataaagtca gtatgaagga 1561 aagtgcttcc tagctgtcct gaacatttca ctggaagtgg accgtgttgc aagactgatt 1621 ggcaatccgt ccggcctgca gcacggtgcc gtgtagtagc actgtttgtc tccattccgt 1681 ttcggtggtg ttatttaaat tcttctctgt tataagagta actgatgatt tgaagtttag 1741 agaaaatagc attcatttat aaataaaatt atcctgtgat tttttttaaa tggcgtttta 1801 ataaaatttg ttattgagga gaatggagac aggaagaagg gctaatgtac actttaaaac 1861 atgggttttt aaagttcaga gaaaatagca ttcatttata aataaagtta tcctgtgatt 1921 tttttaaaaa aa //
Whole sequence Selected region from: to:
All features Gene, RNA, and CDS features only
Show sequence Show reverse complement Show gap features
Your browsing activity is empty.
Activity recording is turned off.
Turn recording back on