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NCBI Reference Sequence: XM_008767092.3
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LOCUS XM_008767092 1632 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus inositol polyphosphate-1-phosphatase (Inpp1), transcript variant X3, mRNA. ACCESSION XM_008767092 VERSION XM_008767092.3 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_086027) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process [WARNING] On Aug 1, 2024 this sequence was replaced by NM_001432664.1. On Feb 22, 2024 this sequence version replaced XM_008767092.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_036323735.1-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/09/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1632 /organism="Rattus norvegicus" /mol_type="mRNA" /strain="BN/NHsdMcwi" /bio_material="RGD 61498" /db_xref="taxon:10116" /chromosome="9" /sex="male" /tissue_type="kidney, spleen, liver" /geo_loc_name="USA: Wisconsin, Milwaukee" /lat_lon="43.05 N 88.04 W" /collected_by="Rebecca Schilling, Melinda Dwinell" gene 1..1632 /gene="Inpp1" /note="inositol polyphosphate-1-phosphatase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 175 long SRA reads, 7 Proteins" /db_xref="GeneID:316376" /db_xref="RGD:1306071" CDS 183..1373 /gene="Inpp1" /codon_start=1 /product="inositol polyphosphate 1-phosphatase isoform X2" /protein_id="XP_008765314.1" /db_xref="GeneID:316376" /db_xref="RGD:1306071" /translation="MSDILLELLRVSEKAANIARACRQQEALFQLLIEEKKGAEKNKK FAADFKTLADVLVQEVIKQNMENKFPGLGKKVFGEESNEFTNDLGEKITVELQSTEKE TAELLSRVLNGNMLASEALAKVVHEDVDLTDPTLESLEISIPQEILGIWVDPIDSTYQ YIKGSANVKSNQGVFPSGLQCVTILIGVYDLQTGLPLMGVINQPFASQNLTTLRWTGQ CYWGLSYMGNNIHSLQLAISKSNSETQTENSDRESSNPFSAVISTSEKDTIKTALSDV CGGSVFPAAGAGYKSLCVVQGLADIYIFSEDTTYKWDSCAAHAILRAMGGGIVDMKEC LERSPDTGLDLPQLLYHVENKGASGVDLWANKGGLIAYRSRNRLDTFLSRLIQSLGPL KTQT" polyA_site 1632 /gene="Inpp1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agcgaggcct ctccggcctg gcgatgccca cccacacaga gcccgatccc cgaaccgaga 61 ggctcagctc gcggatcacg ccgccctcgt agctctgcag aagccgccgg aagaaagcga 121 tcgccagcag agtagcaact gagagccagc gggtgggtga ggctgaggag aaggcgttag 181 aaatgtcaga catcctcctg gaactgctcc gtgtctctga gaaggctgct aacattgcca 241 gggcatgccg gcagcaggag gctctcttcc agctgcttat cgaagagaag aaaggtgcag 301 agaagaacaa gaagtttgct gcagatttca agaccctggc ggatgtgctg gtacaggaag 361 ttataaaaca gaacatggag aacaagtttc caggcttggg gaaaaaagtt tttggagaag 421 aatccaatga gtttacaaat gatttagggg aaaagatcac agtggaactg cagtccacag 481 agaaggaaac agcagagctt cttagcagag tccttaatgg caacatgctg gcgtctgagg 541 cattggctaa ggtggttcat gaggatgtgg atttaactga tcccactctg gagtcactgg 601 agatcagcat cccacaggag attcttggga tttgggtgga tcccatagat tcaacctatc 661 agtatatcaa aggttctgcc aatgttaaat ccaaccaagg agttttcccc agcggacttc 721 agtgtgtgac cattttaatt ggtgtctatg acctacagac aggcctgcct ctgatgggag 781 tcatcaatca gccgtttgcg tcccaaaacc taactacttt aaggtggaca ggacagtgct 841 actggggcct ttcttacatg gggaacaaca tccattccct gcaactcgcc atctctaaaa 901 gcaacagtga aacacaaact gaaaactccg acagggagtc ctccaacccc ttttccgcag 961 tcatcagtac cagcgaaaag gacaccatca aaaccgctct atcagacgtg tgcggaggta 1021 gcgtcttccc tgcggcgggg gctggttaca agagcctctg tgtagtccag ggcttggctg 1081 acatttacat cttctcagaa gacactacgt acaagtggga ctcctgtgct gctcacgcca 1141 ttctgagggc catgggcggg ggcattgtag acatgaaaga gtgcttagag agaagtccag 1201 acacagggct ggatttgcca cagctgctgt atcatgtgga aaataaaggt gcttctgggg 1261 tggatctctg ggccaacaag ggagggctga tagcatacag gtccaggaat cggctggaca 1321 ctttcctaag ccgcctcatc caaagcctgg gacctctaaa gacacaaaca taggactctg 1381 ccctcagggc ccttgagcca aatggaatct tttcctgtta tgtctatctc ttaaagatag 1441 ttttgtccca ttggttaata ttcaccttcc tgttttgagg aacatattcc cattatgtgt 1501 tcataatgtg aatttcagta agttaatggc atttatgtca cagttaagtc ggtatatgat 1561 attgttatat gaacattgtg ctgttaatgt tgcctggaac ccttcaataa aataccaaga 1621 gaggagcaaa aa //
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