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NCBI Reference Sequence: XM_039086557.1
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LOCUS XM_039086557 3091 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus zinc finger protein 2 (Zfp2), transcript variant X10, mRNA. ACCESSION XM_039086557 VERSION XM_039086557.1 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_086028) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_036323735.1-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/09/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3091 /organism="Rattus norvegicus" /mol_type="mRNA" /strain="BN/NHsdMcwi" /bio_material="RGD 61498" /db_xref="taxon:10116" /chromosome="10" /sex="male" /tissue_type="kidney, spleen, liver" /geo_loc_name="USA: Wisconsin, Milwaukee" /lat_lon="43.05 N 88.04 W" /collected_by="Rebecca Schilling, Melinda Dwinell" gene 1..3091 /gene="Zfp2" /gene_synonym="Mkr-2; Mkr2" /note="zinc finger protein 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 long SRA reads, 50 Proteins" /db_xref="GeneID:497897" /db_xref="RGD:1562610" CDS 548..1933 /gene="Zfp2" /gene_synonym="Mkr-2; Mkr2" /codon_start=1 /product="zinc finger protein ZFP2 isoform X1" /protein_id="XP_038942485.1" /db_xref="GeneID:497897" /db_xref="RGD:1562610" /translation="MDREDLWHSALGAVWDSTCWLEEQQERYLGQVTVTQKEIFNEKR VCGGNKTENGSIEHSMLSIPQSIPVTIRLCNWNSYGKGSNQNPKLMKSSRMFVRKKIY ECDECGKSFSQSSSLLKHQRIHTGEKPYKCNVCDKHFIERSSLTVHQRTHTGEKPYKC NECGKAFSQSMNLTVHQRTHTGEKPYQCKECGKAFRKNSSLIQHERIHTGEKPYKCND CGKAFTQSMNLTVHQRTHTGEKPYECNQCGKAFSQSMHLIVHQRSHTGEKPYECSECG KAFSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHSGVKPFECNQCGKA FSKNSSLTQHRRIHTGEKPYQCMVCGKHFTGRSSLTVHQVIHTGEKPYECTECGKAFS QSAYLIEHQRIHTGEKPYECDQCGKAFIKNSSLIVHQRIHTGEKPYKCNECGKSFSRS TNLTRHQRTHT" polyA_site 3091 /gene="Zfp2" /gene_synonym="Mkr-2; Mkr2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgacgcctca tggccttgtg ggaaatgtag tcccgcgtgc ccagtgcggc tgccttcgcg 61 gccagcctct ggtttcttca gtgactgcag gagtctctca tggcttccct tctgtccctc 121 agctctgcct ctagagatgg tgaattctct aggaaggccc tacaggaagg aggaaggcaa 181 tggctgttgg aactctgcca ttgggagctc aggaatcact gatatacaaa gatgtgtctg 241 tggacttcac ttgggaggag tgatgcagct atgttctgca cagaggaacc tgtatggcag 301 ggtgatgcgg gagaactgga gcaccctggt ctccctgggt gagcaacccc accttcagcc 361 ttctgcctat ggaattcaca gcagggcatc aaccatccaa accaaatgtg atctctgacc 421 tggaacaaga actgactctg agaaaaggag aattcccagg ttgcatctct ctgggccggg 481 agtcaagact tgaaaccaga caactccaaa gtccaccatt actgaaaatt tgccctatgg 541 ggtcataatg gacagggaag atctctggca ttcagcttta ggggctgtct gggattctac 601 ctgttggtta gaagagcaac aggaaagata tctgggccaa gtgacagtga cccaaaagga 661 aatatttaat gagaagaggg tgtgtggagg taataaaact gaaaacggtt ccattgagca 721 ttcaatgctt agtataccac aaagcattcc tgtgacaata agactttgta actggaattc 781 atatggaaaa ggttctaacc aaaatcccaa gttaatgaaa tcttcaagaa tgtttgtaag 841 aaagaaaata tatgaatgtg atgagtgtgg gaaaagcttc agtcagagtt catcgctgct 901 taagcaccag aggattcaca ctggggagaa accttacaaa tgtaatgtat gtgacaagca 961 tttcatcgaa cgctcctccc ttactgtaca tcaaaggact catacgggag aaaaacccta 1021 caaatgtaat gagtgtggga aagcctttag tcagagtatg aaccttactg ttcatcaaag 1081 aactcatact ggagagaaac cttatcaatg caaagagtgt gggaaggcct tccgtaagaa 1141 ctcatccctc attcagcatg aaaggattca tactggagag aagccctaca aatgtaacga 1201 ctgtgggaaa gcctttacac aaagcatgaa tcttacagtg caccagagaa ctcatactgg 1261 agaaaagccc tatgaatgta accaatgtgg aaaggccttc agtcaaagca tgcatcttat 1321 tgtccatcag agaagtcata ctggagaaaa accctatgaa tgcagtgaat gtggaaaagc 1381 cttcagtaaa agctcaactc tcacgctaca tcagcgaaat cacactggag aaaaacccta 1441 caaatgtaac aagtgtggta aatcctttag tcaaagtacg taccttatag aacatcagag 1501 acttcattct ggagtgaaac cttttgaatg taaccagtgt ggaaaagctt tcagtaagaa 1561 ttcttccctt actcagcatc gcagaatcca cactggtgag aaaccttatc agtgtatggt 1621 ctgtggaaag catttcactg gaagatcatc cctcactgta caccaagtta tacacactgg 1681 agaaaagccc tatgagtgca ctgaatgtgg aaaggccttt agtcaaagcg cctatcttat 1741 tgaacatcaa agaattcaca ctggtgaaaa accctatgaa tgtgatcagt gtggtaaagc 1801 tttcattaag aattcatccc ttatagtaca ccagaggata catacaggag agaaacctta 1861 taagtgtaat gaatgtggaa aatccttcag caggagcaca aaccttacaa gacatcagag 1921 gactcataca tgagaaaagt tttcaccaac cccttcattt tgattaatct tttgatacta 1981 atcagatgtc acattgatgt agatatgtag taaacataac tattgtggta aacttttagt 2041 tgaagcacaa cacagcatac cagataataa aaccatagag aggaaccgta tgaaagtgga 2101 gaacacgtga ttcagatttg agtagctagg acatgaatga tgaagactta ggctgaagat 2161 aagccctgat gtgtcacact gggaaatctg atttgagcat tccagagttc acactgaatg 2221 gaaaatgtga tagtgataaa ctggatgact gaaaactctg gttcaaccca gttctaatct 2281 cccattacct tgaacaggtc atggtctctt tatctagcaa tgagagattt gggatataga 2341 aagcctatag gatctatatt agccaaaatg cccaacacga agatgcaggg aattttttgg 2401 taattgctgt tgtatttgtt atagagatgc ttctattcca tagtattgtt ttatgggtgt 2461 tttaggttaa agctctctac ctctgaatct tattgtcctt catatccccg aatcactatc 2521 tctcttaaaa tgtaggctag ttgctactga gtagtggata aattgtgcgt attttaatgc 2581 catagcatgc tgtttttgac ttctcagcta acagtcatta aactgttgtt aaacaaactt 2641 actatattta gatgacaatg tgacttaaat agaattttta attacctagg aatcaaatac 2701 atatctttgt gtcttactgg acagtcatgg aaatttaaat acttatgaat tgaacactaa 2761 ttgtagtgaa cagttttatg tcaacgtgac agaaactaaa gtcatctaag aggaaagaat 2821 ctcagttaag aaatgggcta taggtatgcc tgtagggcat tttcttaatt agtgattgat 2881 tggggaagac ccagccattg aggatggtgc catccctggg ctgatggttc tgagttctat 2941 acaaaagcag actgaacaag cagcactcct ccatggcctc tgcatcagct cctttctcca 3001 ggttcctgcc tttgtttact tcctgtcctg actctctggt gatgaacagt gatatggaga 3061 tgtaagccaa ataaaccttt tcctccacgc a //
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