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PREDICTED: Homo sapiens tripartite motif containing 74 (TRIM74), transcript variant X11, mRNA

NCBI Reference Sequence: XM_054358174.1

FASTA Graphics 

LOCUS       XM_054358174             988 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens tripartite motif containing 74 (TRIM74),
            transcript variant X11, mRNA.
ACCESSION   XM_054358174
VERSION     XM_054358174.1
DBLINK      BioProject: PRJNA807723
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_060931) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_009914755.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /isolate="CHM13"
                     /db_xref="taxon:9606"
                     /chromosome="7"
                     /sex="female"
                     /cell_line="CHM13htert"
                     /tissue_type="hydatidiform mole"
                     /note="haploid cell line"
     gene            1..988
                     /gene="TRIM74"
                     /gene_synonym="TRIM50C"
                     /note="tripartite motif containing 74; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 ESTs, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 2 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:378108"
                     /db_xref="HGNC:HGNC:17453"
                     /db_xref="MIM:612550"
     CDS             140..988
                     /gene="TRIM74"
                     /gene_synonym="TRIM50C"
                     /codon_start=1
                     /product="tripartite motif-containing protein 74 isoform
                     X6"
                     /protein_id="XP_054214149.1"
                     /db_xref="GeneID:378108"
                     /db_xref="HGNC:HGNC:17453"
                     /db_xref="MIM:612550"
                     /translation="MAWQVSLLELEDRLQCPICLEVFKESLMLQCGHSYCKGCLVSLS
                     YHLDTKVRCPMCWQVVDGSSSLPNVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEK
                     DQELICGLCGLLGSHQHHPVTPVSTICSRMKEELAALFSELKQEQKKVDELIAKLVNN
                     RTRIVNESDVFSWVIRREFQELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGT
                     RERLAQAECVLEQFGNEDHHEFIWKFHSMASRLTKTEELEKKWRNGLAASHSLPQQVR
                     PQRRTP"
ORIGIN      
        1 ggcgtccagc tgcacttccc acttctgact ctgtgcctgc tgttccctgc tgggaagaag
       61 aaaagccagt gatgctggct tgaggccata gtgggaggcc cagtggatcc tgagaagcta
      121 gcccgggcag tgagtgtgga tggcttggca ggtgagcctg ctggagctgg aggaccggct
      181 tcagtgtccc atctgcctgg aggtcttcaa ggagtcccta atgctacagt gcggccactc
      241 ctactgcaag ggctgcctgg tttccctgtc ctaccacctg gacaccaagg tgcgctgccc
      301 catgtgctgg caggtggtgg acggcagcag ctccttgccc aacgtctccc tggcctgggt
      361 gatcgaagcc ctgaggctcc ctggggaccc ggagcccaag gtctgcgtgc accaccggaa
      421 cccgctcagc cttttctgcg agaaggacca ggagctcatc tgtggcctct gcggtctgct
      481 gggctcccac caacaccacc cggtcacgcc cgtctccacc atctgcagcc gcatgaagga
      541 ggagctcgca gccctcttct ctgagctgaa gcaggagcag aagaaggtgg atgagctcat
      601 cgccaaactg gtgaacaacc ggacccgaat cgtcaatgag tcggatgtct tcagctgggt
      661 gatccgccgc gagttccagg agctgcgcca cccggtggac gaggagaagg cccgctgcct
      721 ggaggggata gggggtcaca cccgtggcct ggtggcctcc ctggacatgc agctggagca
      781 ggcccaggga acccgggagc ggctggccca agccgagtgt gtgctggaac agttcggaaa
      841 tgaggaccac catgagttca tctggaagtt ccactccatg gcctccagat tgacaaagac
      901 tgaagaactg gagaagaagt ggcgaaacgg gctcgcagcg tcgcattccc taccccagca
      961 ggtgcgcccg cagcgtcgca ctccctag
//
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