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Rattus norvegicus ubiquitin specific peptidase 18, mRNA (cDNA clone MGC:94088 IMAGE:7124857), complete cds

GenBank: BC079101.1

FASTA Graphics 

LOCUS       BC079101                1631 bp    mRNA    linear   ROD 17-JUL-2006
DEFINITION  Rattus norvegicus ubiquitin specific peptidase 18, mRNA (cDNA clone
            MGC:94088 IMAGE:7124857), complete cds.
ACCESSION   BC079101
VERSION     BC079101.1
KEYWORDS    MGC.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1631)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1631)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-AUG-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Howard Jacobs
            cDNA Library Preparation: Express Genomics
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 183 Row: k Column: 19
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 62078848.
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /clone="MGC:94088 IMAGE:7124857"
                     /tissue_type="Lung, rat (Brown Norway)"
                     /clone_lib="NIH_MGC_232"
                     /lab_host="DH10B"
                     /note="Vector: pExpress1"
     gene            1..1631
                     /gene="Usp18"
                     /db_xref="GeneID:312688"
                     /db_xref="RGD:1359153"
     CDS             119..1207
                     /gene="Usp18"
                     /codon_start=1
                     /product="ubiquitin specific peptidase 18"
                     /protein_id="AAH79101.1"
                     /db_xref="GeneID:312688"
                     /db_xref="RGD:1359153"
                     /translation="MGKGFGLLRKTCQSVVANPQQHSALEEEKNMKRKRVLSRELCSA
                     WDRPHGFVGLHNIGQTCCLNSLIQVFMMNVDFRMVLKRITVPRGAEEQKRSVPFQLLL
                     LLEKMQDSRQKAVLPTELVQCLQKYNVPLFVQHDAAHLFLTIWNLTKDQITDIDLAER
                     LQDLFTIWTEESLMCVGCGAESSRRGKLLTLSLPLFDMDSKPLKTLEDALRCFFQPKE
                     LASSDKCFCETCGKKTPCKQAQKLTGFPQTLTIHLMRFSVRNSQTVKICHSVYFPQSL
                     DFSQILPTTDQSEIHYELFAVIAHVGMADFGHYCAYIRNPVDGEWFCFNDSHVCWVTW
                     KDVQCTYGDHIYRWRETAYLLVYMKTGS"
ORIGIN      
        1 gcttcggtgc ttgagagggt cctttctggc ttgtgtagac ccttcctgga agtgaagttg
       61 tggaatcctg acctccagtc ctgcccgttc caagcgtggg gtttgggtgt gatcactaat
      121 gggcaaaggg tttgggctcc tgaggaaaac ctgccagtca gttgtggcta atcctcagca
      181 gcactcagct ctggaggaag agaagaacat gaagaggaag agagtgctgt ctagagagct
      241 ctgcagtgcc tgggaccgcc ctcatggttt cgttgggtta cacaacatcg gtcagacatg
      301 ttgccttaac tccttgattc aggtgttcat gatgaatgtg gacttcagga tggtattgaa
      361 gaggataaca gtgccacgag gggcagaaga acagaagaga agtgtcccct tccagctgct
      421 tttgctgctg gagaagatgc aggacagccg gcagaaggca gtgctgccca cggagctcgt
      481 tcagtgcctc cagaaataca acgtgccatt gtttgtccag cacgatgctg ctcatctctt
      541 ccttacaatc tggaacctga ctaaggacca gatcacggac atagacttgg cagagcggct
      601 gcaggatctg ttcacaatct ggaccgagga gtccctgatg tgcgtgggct gtggagcaga
      661 gagcagcagg aggggcaagt tgctcactct ctctcttcct ctttttgata tggattcaaa
      721 gcccctaaaa acactggagg atgccttgag atgtttcttc cagcccaaag agttagcaag
      781 ctcagacaag tgcttctgtg agacctgcgg gaagaagacg ccttgcaaac aggctcagaa
      841 gctgactggt ttccctcaga ccctgaccat ccacctcatg agattctctg tcaggaactc
      901 acagacagta aagatctgcc actcagtgta cttcccgcag agcttggatt tcagtcagat
      961 tctgccaacc acggatcagt ctgagataca ctatgaactc tttgctgtga ttgcccatgt
     1021 tgggatggca gacttcggtc attactgtgc ctacatccgg aatcccgtgg atggagaatg
     1081 gttctgcttc aatgattcac atgtttgttg ggtgacctgg aaggatgtcc agtgtaccta
     1141 tggggatcac atatatcgtt ggagggaaac tgcctatctc ttggtttaca tgaagactgg
     1201 atcctgacag atatactcac accttcagag agtgacagac tcttttctcc tctcctgtac
     1261 ccacatctgc tgcatttcaa cgagaatcgt aatttaaaaa ccataattaa gccctattta
     1321 taagcaagga ttattattat tgctgtggct tggctgtagt ttgtctccca acagctcaca
     1381 cacagaaggc ttggtcttta gtatggaggc gtttgggtga cagaactttt aagggacagg
     1441 gcccagtggg aggtaatcag ttcatgggat ctctcttctg tgcactaata gttccttttc
     1501 tgtttctccg tggtgatgca aacagggtga tccaacatgc cagtgccaag ctggttggat
     1561 cctctagctt tcaaaattcc aagtcaaata aatgttatta cacactaaaa aaaaaaaaaa
     1621 aaaaaaaaaa a
//
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