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Select item 109107851.

De novo assembly and annotation of the Patagonian toothfish (Dissostichus eleginoides) genome

David Ryder, David Stone, Diana Minardi, Ainsley Riley, Justin Avant, Lisa Cross, Marta Soeffker, Deborah Davidson, Andrew Newman, Peter Thomson, Chris Darby, Ronny van Aerle

BMC Genomics. 2024; 25: 233. Published online 2024 Mar 4. doi: 10.1186/s12864-024-10141-4

PMCID:: PMC10910785

Abstract Article PDF–3.7M

Select item 102567662.

Genomics of cold adaptations in the Antarctic notothenioid fish radiation

Iliana Bista, Jonathan M. D. Wood, Thomas Desvignes, Shane A. McCarthy, Michael Matschiner, Zemin Ning, Alan Tracey, James Torrance, Ying Sims, William Chow, Michelle Smith, Karen Oliver, Leanne Haggerty, Walter Salzburger, John H. Postlethwait, Kerstin Howe, Melody S. Clark, H. William Detrich, III, C.-H. Christina Cheng, Eric A. Miska, Richard Durbin

Nat Commun. 2023; 14: 3412. Published online 2023 Jun 9. doi: 10.1038/s41467-023-38567-6

PMCID:: PMC10256766

Abstract Article PDF–2.0M

Select item 101387763.

Single Copies of the 5S rRNA Inserted into 45S rDNA Intergenic Spacers in the Genomes of Nototheniidae (Perciformes, Actinopterygii)

Alexander Dyomin, Svetlana Galkina, Arina Ilina, Elena Gaginskaya

Int J Mol Sci. 2023 Apr; 24(8): 7376. Published online 2023 Apr 17. doi: 10.3390/ijms24087376

PMCID:: PMC10138776

Abstract Article PDF–2.5M

Select item 99853374.

Genomics of Secondarily Temperate Adaptation in the Only Non-Antarctic Icefish

Angel G Rivera-Colón, Niraj Rayamajhi, Bushra Fazal Minhas, Giovanni Madrigal, Kevin T Bilyk, Veronica Yoon, Mathias Hüne, Susan Gregory, C H Christina Cheng, Julian M Catchen

Mol Biol Evol. 2023 Mar; 40(3): msad029. Published online 2023 Feb 21. doi: 10.1093/molbev/msad029

PMCID:: PMC9985337

Abstract Article PDF–6.0M

Select item 93128855.

Chromosome-Level Genome Assembly and Transcriptome Comparison Analysis of Cephalopholis sonnerati and Its Related Grouper Species

Zhenzhen Xie, Dengdong Wang, Shoujia Jiang, Cheng Peng, Qing Wang, Chunren Huang, Shuisheng Li, Haoran Lin, Yong Zhang

Biology (Basel) 2022 Jul; 11(7): 1053. Published online 2022 Jul 13. doi: 10.3390/biology11071053

PMCID:: PMC9312885

Abstract Article PDF–2.9M

Select item 86781586.

Advancing human disease research with fish evolutionary mutant models

Emily A. Beck, Hope M. Healey, Clayton M. Small, Mark C. Currey, Thomas Desvignes, William A. Cresko, John H. Postlethwait

Trends Genet. Author manuscript; available in PMC 2023 Jan 1.

Published in final edited form as: Trends Genet. 2022 Jan; 38(1): 22–44. Published online 2021 Jul 29. doi: 10.1016/j.tig.2021.07.002

PMCID:: PMC8678158

Abstract Article PDF–1.2M

Select item 76806397.

Characterization of the hypoxia-inducible factor-1 pathway in hearts of Antarctic notothenioid fishes

K.M. O’Brien, A.S. Rix, T.J. Grove, J. Sarrimanolis, A. Brookings, M. Roberts, E.L. Crockett

Comp Biochem Physiol B Biochem Mol Biol. Author manuscript; available in PMC 2021 Dec 1.

Published in final edited form as: Comp Biochem Physiol B Biochem Mol Biol. 2020 Dec; 250: 110505. Published online 2020 Sep 20. doi: 10.1016/j.cbpb.2020.110505

PMCID:: PMC7680639

Abstract Article PDF–1012K

Select item 102281508.

Mitochondrial membranes in cardiac muscle from Antarctic notothenioid fishes vary in phospholipid composition and membrane fluidity

Amanda M. Biederman, Donald E. Kuhn, Kristin M. O’Brien, Elizabeth L. Crockett

Comp Biochem Physiol B Biochem Mol Biol. Author manuscript; available in PMC 2023 May 30.

Published in final edited form as: Comp Biochem Physiol B Biochem Mol Biol. 2019 Sep; 235: 46–53. Published online 2019 Jun 6. doi: 10.1016/j.cbpb.2019.05.011

PMCID:: PMC10228150

Abstract Article PDF–460K

Select item 63360079.

Adaptation of Proteins to the Cold in Antarctic Fish: A Role for Methionine?

Camille Berthelot, Jane Clarke, Thomas Desvignes, H William Detrich, III, Paul Flicek, Lloyd S Peck, Michael Peters, John H Postlethwait, Melody S Clark

Genome Biol Evol. 2019 Jan; 11(1): 220–231. Published online 2018 Nov 29. doi: 10.1093/gbe/evy262

PMCID:: PMC6336007

Abstract Article PDF–1.9M

Select item 616533010.

UV-Protective Compounds in Marine Organisms from the Southern Ocean

Laura Núñez-Pons, Conxita Avila, Giovanna Romano, Cinzia Verde, Daniela Giordano

Mar Drugs. 2018 Sep; 16(9): 336. Published online 2018 Sep 14. doi: 10.3390/md16090336

PMCID:: PMC6165330

Abstract Article PDF–3.7M

Select item 595114411.

Lighten up the dark: metazoan parasites as indicators for the ecology of Antarctic crocodile icefish (Channichthyidae) from the north-west Antarctic Peninsula

Thomas Kuhn, Vera M.A. Zizka, Julian Münster, Regina Klapper, Simonetta Mattiucci, Judith Kochmann, Sven Klimpel

PeerJ. 2018; 6: e4638. Published online 2018 May 11. doi: 10.7717/peerj.4638

PMCID:: PMC5951144

Abstract Article PDF–6.4M

Select item 298159112.

Antarctic Notothenioid Fishes: Genomic Resources and Strategies for Analyzing an Adaptive Radiation

H. W. Detrich, III, Chris T. Amemiya

Integr Comp Biol. 2010 Dec; 50(6): 1009–1017. Published online 2010 Jul 12. doi: 10.1093/icb/icq071

PMCID:: PMC2981591

Abstract Article PDF–275K

Select item 244317913.

Fisheries in the Southern Ocean: an ecosystem approach

Karl-Hermann Kock, Keith Reid, John Croxall, Stephen Nicol

Philos Trans R Soc Lond B Biol Sci. 2007 Dec 29; 362(1488): 2333–2349. Published online 2007 May 30. doi: 10.1098/rstb.2006.1954

PMCID:: PMC2443179

Abstract Article PDF–474K

Select item 1100443614.

Secreted novel AID/APOBEC-like deaminase 1 (SNAD1) – a new important player in fish immunology

Anna M. Majewska, Mariola A. Dietrich, Lucyna Budzko, Mikołaj Adamek, Marek Figlerowicz, Andrzej Ciereszko

Front Immunol. 2024; 15: 1340273. Published online 2024 Mar 27. doi: 10.3389/fimmu.2024.1340273

PMCID:: PMC11004436

Abstract Article PDF–4.3M

Select item 1065107815.

Cold-Driven Hemoglobin Evolution in Antarctic Notothenioid Fishes Prior to Hemoglobin Gene Loss in White-Blooded Icefishes

Thomas Desvignes, Iliana Bista, Karina Herrera, Audrey Landes, John H Postlethwait

Mol Biol Evol. 2023 Nov; 40(11): msad236. Published online 2023 Oct 25. doi: 10.1093/molbev/msad236

PMCID:: PMC10651078

Abstract Article PDF–2.0M

Select item 1052271416.

A chromosome-level reference genome of the Antarctic blackfin icefish Chaenocephalus aceratus

Seung Jae Lee, Jinmu Kim, Eun Kyung Choi, Euna Jo, Minjoo Cho, Jeong-Hoon Kim, Hyun Park

Sci Data. 2023; 10: 657. Published online 2023 Sep 26. doi: 10.1038/s41597-023-02561-w

Correction in:: Sci Data. 2024; 11: 47.

PMCID:: PMC10522714

Abstract Article PDF–4.1M

Select item 1029835117.

Chromosome-Level Genome Assembly and Circadian Gene Repertoire of the Patagonia Blennie Eleginops maclovinus—The Closest Ancestral Proxy of Antarctic Cryonotothenioids

Chi-Hing Christina Cheng, Angel G. Rivera-Colón, Bushra Fazal Minhas, Loralee Wilson, Niraj Rayamajhi, Luis Vargas-Chacoff, Julian M. Catchen

Genes (Basel) 2023 Jun; 14(6): 1196. Published online 2023 May 30. doi: 10.3390/genes14061196

PMCID:: PMC10298351

Abstract Article PDF–5.2M

Select item 1014791718.

Novel mitochondrial genome rearrangements including duplications and extensive heteroplasmy could underlie temperature adaptations in Antarctic notothenioid fishes

Bushra Fazal Minhas, Emily A. Beck, C.-H. Christina Cheng, Julian Catchen

Sci Rep. 2023; 13: 6939. Published online 2023 Apr 28. doi: 10.1038/s41598-023-34237-1

PMCID:: PMC10147917

Abstract Article PDF–2.8M

Select item 932192719.

Comparative Analysis of the pIgR Gene from the Antarctic Teleost Trematomus bernacchii Reveals Distinctive Features of Cold-Adapted Notothenioidei

Alessia Ametrano, Simona Picchietti, Laura Guerra, Stefano Giacomelli, Umberto Oreste, Maria Rosaria Coscia

Int J Mol Sci. 2022 Jul; 23(14): 7783. Published online 2022 Jul 14. doi: 10.3390/ijms23147783

PMCID:: PMC9321927

Abstract Article PDF–6.1M

Select item 888282120.

Toll-Like Receptor Evolution: Does Temperature Matter?

Cármen Sousa, Stefan A. Fernandes, João C. R. Cardoso, Ying Wang, Wanying Zhai, Pedro M. Guerreiro, Liangbiao Chen, Adelino V. M. Canário, Deborah M. Power

Front Immunol. 2022; 13: 812890. Published online 2022 Feb 14. doi: 10.3389/fimmu.2022.812890