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Select item 96208511.

Wound Healing Insights from Flies and Fish

Anne George, Paul Martin

Cold Spring Harb Perspect Biol. 2022 Nov; 14(11): a041217. doi: 10.1101/cshperspect.a041217

PMCID:: PMC9620851

Abstract Article PDF–2.3M

Select item 98821522.

A Multiplexed SEC-MS Approach to Systematically Study the Interplay Between Protein Assembly-States and Phosphorylation Events

Ella Doron-Mandel, Benjamin Judah Bokor, Yanzhe Ma, Lena Annika Street, Lauren Clarissa Tang, Ahmed Ali Abdou, Neel H Shah, George Rosenberger, Marko Jovanovic

Version 3. bioRxiv. Preprint. NaN NaN [revised 2024 Aug 1]. doi: 10.1101/2023.01.12.523793

PMCID:: PMC9882152

Abstract PDF–9.9M

Select item 109423003.

Proteome-scale tissue mapping using mass spectrometry based on label-free and multiplexed workflows

Yumi Kwon, Jongmin Woo, Fengchao Yu, Sarah M. Williams, Lye Meng Markillie, Ronald J. Moore, Ernesto S. Nakayasu, Jing Chen, Martha Campbell-Thompson, Clayton E. Mathews, Alexey I. Nesvizhskii, Wei-Jun Qian, Ying Zhu

Version 2. bioRxiv. Preprint. 2024 Mar 4 [revised 2024 Jul 10]. doi: 10.1101/2024.03.04.583367

Published in:: Mol Cell Proteomics. 2024 Nov; 23(11): 100841.

PMCID:: PMC10942300

Abstract Article PDF–1.9M

Select item 103124494.

Complexes of vertebrate TMC1/2 and CIB2/3 proteins form hair-cell mechanotransduction cation channels

Arnaud P. J. Giese, Wei-Hsiang Weng, Katie S. Kindt, Hui Ho Vanessa Chang, Jonathan S. Montgomery, Evan M. Ratzan, Alisha J. Beirl, Roberto Aponte Rivera, Jeffrey M. Lotthammer, Sanket Walujkar, Mark P. Foster, Omid A. Zobeiri, Jeffrey R. Holt, Saima Riazuddin, Kathleen E. Cullen, Marcos Sotomayor, Zubair M. Ahmed

Version 2. bioRxiv. Preprint. 2023 May 30 [revised 2024 Jul 5]. doi: 10.1101/2023.05.26.542533

PMCID:: PMC10312449

Abstract Article PDF–16M

Select item 107601385.

A protective and broadly binding antibody class engages the influenza virus hemagglutinin head at its stem interface

Holly C. Simmons, Joel Finney, Ryutaro Kotaki, Yu Adachi, Annie Park Moseman, Akiko Watanabe, Shengli Song, Lindsey R. Robinson-McCarthy, Valerie Le Sage, Masayuki Kuraoka, E. Ashley Moseman, Garnett Kelsoe, Yoshimasa Takahashi, Kevin R. McCarthy

Version 2. bioRxiv. Preprint. 2023 Dec 14 [revised 2024 Jul 1]. doi: 10.1101/2023.12.13.571543

PMCID:: PMC10760138

Abstract Article PDF–5.4M

Select item 110424126.

Transformer-based de novo peptide sequencing for data-independent acquisition mass spectrometry

Shiva Ebrahimi, Xuan Guo

Version 3. ArXiv. Preprint. NaN NaN [revised 2024 Jun 26]: arXiv:2402.11363v3.

PMCID:: PMC11042412

Abstract Article PDF–5.1M

Select item 110889017.

Exosome miR-4738-3p-mediated regulation of COL1A2 through the NF-κB and inflammation signaling pathway alleviates osteoarthritis low-grade inflammation symptoms

Jun Xu, Kaifeng Zhou, Huijie Gu, Yiming Zhang, Liang Wu, Chong Bian, Zhongyue Huang, Guangnan Chen, Xiangyang Cheng, Xiaofan Yin

Biomol Biomed. 2024 Jun 1; 24(3): 520–536. Published online 2024 Jun 1. doi: 10.17305/bb.2023.9921

PMCID:: PMC11088901

Abstract Article PDF–3.9M

Select item 110888938.

Silencing METTL14 alleviates liver injury in non-alcoholic fatty liver disease by regulating mitochondrial homeostasis

Wei Wang, Jun Yan, Long Han, Zi-Lin Zou, Ai-Lei Xu

Biomol Biomed. 2024 Jun 1; 24(3): 505–519. Published online 2024 Jun 1. doi: 10.17305/bb.2023.9698

PMCID:: PMC11088893

Abstract Article PDF–4.6M

Select item 106351589.

The FXR1 network acts as signaling scaffold for actomyosin remodeling

Xiuzhen Chen, Mervin M. Fansler, Urška Janjoš, Jernej Ule, Christine Mayr

Version 3. bioRxiv. Preprint. NaN NaN [revised 2024 May 25]. doi: 10.1101/2023.11.05.565677

Published in:: Cell. 2024 Sep 5; 187(18): 5048–5063.e25.

PMCID:: PMC10635158

Abstract Article PDF–19M

Select item 1080267910.

Noise robustness and metabolic load determine the principles of central dogma regulation

Teresa W. Lo, Han James Choi, Dean Huang, Paul A. Wiggins

Version 4. ArXiv. Preprint. NaN NaN [revised 2024 Aug 15]: arXiv:2310.13803v4.

Published in:: Sci Adv. 2024 Aug 23; 10(34): eado3095.

PMCID:: PMC10802679

Abstract Article PDF–8.1M

Select item 1097986211.

RNA Polymerase II hypertranscription in cancer FFPE samples

Steven Henikoff, Jorja G. Henikoff, Ronald M. Paranal, Jacob E. Greene, Ye Zheng, Zachary R. Russell, Frank Szulzewsky, Sita Kugel, Eric C. Holland, Kami Ahmad

Version 3. bioRxiv. Preprint. NaN NaN [revised 2024 May 21]. doi: 10.1101/2024.02.28.582647

PMCID:: PMC10979862

Abstract Article PDF–6.8M

Select item 1108148012.

Quercetin, Main Active Ingredient of Moutan Cortex, Alleviates Chronic Orofacial Pain via Block of Voltage-Gated Sodium Channel

Zhanli Liu, Zhiming Shan, Haoyi Yang, Yanmei Xing, Weijie Guo, Jing Cheng, Yuanxu Jiang, Song Cai, Chaoran Wu, Jessica Aijia Liu, Chi Wai Cheung, Yunping Pan

Anesth Analg. 2024 Jun; 138(6): 1324–1336. Published online 2024 May 20. doi: 10.1213/ANE.0000000000006730

PMCID:: PMC11081480

Abstract Article PDF–1.9M

Select item 1109115113.

SNPs in microRNA seed region and impact of miR-375 in concurrent regulation of multiple lipid accumulation-related genes

Jiyeon Lee, Inpyo Hong, Chanwoo Lee, Daehyun Kim, Sunghak Kim, Yoonseok Lee

Sci Rep. 2024; 14: 10924. Published online 2024 May 13. doi: 10.1038/s41598-024-61673-4

PMCID:: PMC11091151

Abstract Article PDF–2.4M

Select item 1109110214.

Genomic properties of a Bartonella quintana strain from Japanese macaque (Macaca fuscata) revealed by genome comparison with human and rhesus macaque strains

Shingo Sato, Emu Nishioka, Hidenori Kabeya, Soichi Maruyama

Sci Rep. 2024; 14: 10941. Published online 2024 May 13. doi: 10.1038/s41598-024-61782-0

PMCID:: PMC11091102

Abstract Article PDF–3.2M

Select item 1108967915.

Identification and verification of a novel signature that combines cuproptosis-related genes with ferroptosis-related genes in osteoarthritis using bioinformatics analysis and experimental validation

Baoqiang He, Yehui Liao, Minghao Tian, Chao Tang, Qiang Tang, Fei Ma, Wenyang Zhou, Yebo Leng, Dejun Zhong

Arthritis Res Ther. 2024; 26: 100. Published online 2024 May 13. doi: 10.1186/s13075-024-03328-3

PMCID:: PMC11089679

Abstract Article PDF–11M

Select item 1108803716.

Characterization of alternative splicing events and prognostic signatures in gastric cancer

Nan Zhu, Yupeng Zhao, Wenjing Yan, Lan Wei, Qingqing Sang, Jianfang Li, Bingya Liu, Beiqin Yu

Cancer Cell Int. 2024; 24: 167. Published online 2024 May 11. doi: 10.1186/s12935-024-03348-8

PMCID:: PMC11088037

Abstract Article PDF–3.7M

Select item 1108755317.

Fused in sarcoma (FUS) inhibits milk production efficiency in mammals

Haili Shao, Jipeng Huang, Hui Wang, Guolei Wang, Xu Yang, Mei Cheng, Changjie Sun, Li Zou, Qin Yang, Dandan Zhang, Zhen Liu, Xuelong Jiang, Lei Shi, Peng Shi, Baowei Han, Baowei Jiao

Nat Commun. 2024; 15: 3953. Published online 2024 May 10. doi: 10.1038/s41467-024-48428-5

PMCID:: PMC11087553

Abstract Article PDF–7.8M

Select item 1108746418.

Comprehensive assessment of mRNA isoform detection methods for long-read sequencing data

Yaqi Su, Zhejian Yu, Siqian Jin, Zhipeng Ai, Ruihong Yuan, Xinyi Chen, Ziwei Xue, Yixin Guo, Di Chen, Hongqing Liang, Zuozhu Liu, Wanlu Liu

Nat Commun. 2024; 15: 3972. Published online 2024 May 10. doi: 10.1038/s41467-024-48117-3

PMCID:: PMC11087464

Abstract Article PDF–1.9M

Select item 1108705119.

Large-scale deorphanization of Nematostella vectensis neuropeptide G protein-coupled receptors supports the independent expansion of bilaterian and cnidarian peptidergic systems

Daniel Thiel, Luis Alfonso Yañez Guerra, Amanda Kieswetter, Alison G Cole, Liesbet Temmerman, Ulrich Technau, Gáspár Jékely

eLife. 2024; 12: RP90674. Published online 2024 May 10. doi: 10.7554/eLife.90674

PMCID:: PMC11087051

Abstract Article PDF–6.3M

Select item 1108684320.

Tamarix aphylla derived metabolites ameliorate indomethacin-induced gastric ulcers in rats by modulating the MAPK signaling pathway, alleviating oxidative stress and inflammation: In vivo study supported by pharmacological network analysis

Faisal H. Altemani, Abeer H. Elmaidomy, Dalia H. Abu-Baih, Azza M. Abdel Zaher, Fatma Alzahraa Mokhtar, Naseh A. Algehainy, Hussain T. Bakhsh, Gerhard Bringmann, Usama Ramadan Abdelmohsen, Omnia Hesham Abdelhafez

PLoS One. 2024; 19(5): e0302015. Published online 2024 May 10. doi: 10.1371/journal.pone.0302015