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Items: 1 to 20 of 121

1.
Comprehensive analysis of DNA repair gene polymorphisms and survival in patients with early stage non‐small‐cell lung cancer
Min Kim, Hyo‐Gyoung Kang, Shin Yup Lee, Hyung Cheol Lee, Eung Bae Lee, Yi Young Choi, Won Kee Lee, Sukki Cho, Guang Jin, Hyo‐Sung Jheon, Ji Woong Son, Myung‐Hoon Lee, Deuk Kju Jung, Seung Ick Cha, Chang Ho Kim, Young Mo Kang, Sin Kam, Tae Hoon Jung, Sanghoon Jheon, Jae Yong Park
Cancer Sci. 2010 Nov; 101(11): 2436–2442. Published online 2010 Jul 31. doi: 10.1111/j.1349-7006.2010.01699.x
PMCID:
PMC11159840
AbstractArticlePDF–209K
2.
Lesion recognition by XPC, TFIIH and XPA in DNA Excision Repair
Jinseok Kim, Chia-Lung Li, Xuemin Chen, Yanxiang Cui, Filip M. Golebiowski, Huaibin Wang, Fumio Hanaoka, Kaoru Sugasawa, Wei Yang
Nature. Author manuscript; available in PMC 2023 Aug 11.
Published in final edited form as: Nature. 2023 May; 617(7959): 170–175. Published online 2023 Apr 19. doi: 10.1038/s41586-023-05959-z
PMCID:
PMC10416759
AbstractArticlePDF–6.2M
3.
A Significant Increasing Risk Association between Cigarette Smoking and XPA and XPC Genes Polymorphisms
Safiah Almushawwah, Mikhlid H. Almutairi, Abdullah M. Alamri, Abdelhabib Semlali
Genes (Basel) 2023 Jul; 14(7): 1349. Published online 2023 Jun 27. doi: 10.3390/genes14071349
PMCID:
PMC10379612
AbstractArticlePDF–314K
4.
A disease-associated XPA allele interferes with TFIIH binding and primarily affects transcription-coupled nucleotide excision repair
Diana van den Heuvel, Mihyun Kim, Annelotte P. Wondergem, Paula J. van der Meer, Myrèse Witkamp, Ferdy Lambregtse, Hyun-Suk Kim, Folkert Kan, Katja Apelt, Angela Kragten, Román González-Prieto, Alfred C. O. Vertegaal, Jung-Eun Yeo, Byung-Gyu Kim, Remco van Doorn, Orlando D. Schärer, Martijn S. Luijsterburg
Proc Natl Acad Sci U S A. 2023 Mar 14; 120(11): e2208860120. Published online 2023 Mar 9. doi: 10.1073/pnas.2208860120
PMCID:
PMC10089173
AbstractArticlePDF–6.2M
5.
Homozygous CRISPR/Cas9 Knockout Generated a Novel Functionally Active Exon 1 Skipping XPA Variant in Melanoma Cells
Veronika Banicka, Marie Christine Martens, Rüdiger Panzer, David Schrama, Steffen Emmert, Lars Boeckmann, Alexander Thiem
Int J Mol Sci. 2022 Oct; 23(19): 11649. Published online 2022 Oct 1. doi: 10.3390/ijms231911649
PMCID:
PMC9569948
AbstractArticlePDF–3.8M
6.
Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery
Pierre C. Havugimana, Raghuveera Kumar Goel, Sadhna Phanse, Ahmed Youssef, Dzmitry Padhorny, Sergei Kotelnikov, Dima Kozakov, Andrew Emili
Nat Commun. 2022; 13: 4043. Published online 2022 Jul 13. doi: 10.1038/s41467-022-31809-z
PMCID:
PMC9279285
AbstractArticlePDF–2.5M
7.
OpenCell: proteome-scale endogenous tagging enables the cartography of human cellular organization
Nathan H. Cho, Keith C. Cheveralls, Andreas-David Brunner, Kibeom Kim, André C. Michaelis, Preethi Raghavan, Hirofumi Kobayashi, Laura Savy, Jason Y. Li, Hera Canaj, James Y.S. Kim, Edna M. Stewart, Christian Gnann, Frank McCarthy, Joana P. Cabrera, Rachel M. Brunetti, Bryant B. Chhun, Greg Dingle, Marco Y. Hein, Bo Huang, Shalin B. Mehta, Jonathan S. Weissman, Rafael Gómez-Sjöberg, Daniel N. Itzhak, Loic A. Royer, Matthias Mann, Manuel D. Leonetti
Science. Author manuscript; available in PMC 2022 Sep 11.
Published in final edited form as: Science. 2022 Mar 11; 375(6585): eabi6983. Published online 2022 Mar 11. doi: 10.1126/science.abi6983
PMCID:
PMC9119736
AbstractArticlePDF–3.3M
8.
XPA Enhances Temozolomide Resistance of Glioblastoma Cells by Promoting Nucleotide Excision Repair
Weimin Dai, An Wu, Yunping Li, Guofeng Yu, Xinjiang Yan
Cell Transplant. 2022 Jan-Dec; 31: 09636897221092778. Published online 2022 May 10. doi: 10.1177/09636897221092778
PMCID:
PMC9096195
AbstractArticlePDF–2.3M
9.
Nucleotide Excision Repair Pathway Activity Is Inhibited by Airborne Particulate Matter (PM10) through XPA Deregulation in Lung Epithelial Cells
Ericka Marel Quezada-Maldonado, Yolanda I. Chirino, María Eugenia Gonsebatt, Rocío Morales-Bárcenas, Yesennia Sánchez-Pérez, Claudia M. García-Cuellar
Int J Mol Sci. 2022 Feb; 23(4): 2224. Published online 2022 Feb 17. doi: 10.3390/ijms23042224
PMCID:
PMC8878008
AbstractArticlePDF–2.2M
10.
XPA is susceptible to proteolytic cleavage by cathepsin L during lysis of quiescent cells
Saman Khan, William Cvammen, Nadeen Anabtawi, Jun-Hyuk Choi, Michael G. Kemp
DNA Repair (Amst) Author manuscript; available in PMC 2023 Jan 1.
Published in final edited form as: DNA Repair (Amst). 2022 Jan; 109: 103260. Published online 2021 Dec 2. doi: 10.1016/j.dnarep.2021.103260
PMCID:
PMC8748394
AbstractArticlePDF–598K
11.
SNX27-driven membrane localisation of OTULIN antagonises linear ubiquitination and NF-κB signalling activation
Ruona Shi, Xue Shi, Dajiang Qin, Shibing Tang, Michiel Vermeulen, Xiaofei Zhang
Cell Biosci. 2021; 11: 146. Published online 2021 Jul 27. doi: 10.1186/s13578-021-00659-5
PMCID:
PMC8314547
AbstractArticlePDF–3.7M
12.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
13.
Impact of cytosine methylation on DNA binding specificities of human transcription factors
Yimeng Yin, Ekaterina Morgunova, Arttu Jolma, Eevi Kaasinen, Biswajyoti Sahu, Syed Khund-Sayeed, Pratyush K. Das, Teemu Kivioja, Kashyap Dave, Fan Zhong, Kazuhiro R. Nitta, Minna Taipale, Alexander Popov, Paul A. Ginno, Silvia Domcke, Jian Yan, Dirk Schübeler, Charles Vinson, Jussi Taipale
Science. Author manuscript; available in PMC 2021 Mar 30.
Published in final edited form as: Science. 2017 May 5; 356(6337): eaaj2239. doi: 10.1126/science.aaj2239
PMCID:
PMC8009048
AbstractArticlePDF–2.6M
14.
Synthetic lethal and resistance interactions with BET bromodomain inhibitors in triple-negative breast cancer
Shaokun Shu, Hua-Jun Wu, Jennifer Y. Ge, Rhamy Zeid, Isaac S. Harris, Bojana Jovanović, Katherine Murphy, Binbin Wang, Xintao Qiu, Jennifer E. Endress, Jaime Reyes, Klothilda Lim, Alba Font-Tello, Sudeepa Syamala, Tengfei Xiao, Chandra Sekhar Reddy Chilamakuri, Evangelia K. Papachristou, Clive D’Santos, Jayati Anand, Kunihiko Hinohara, Wei Li, Thomas O. McDonald, Adrienne Luoma, Rebecca J. Modiste, Quang-De Nguyen, Brittany Michel, Paloma Cejas, Cigall Kadoch, Jacob D. Jaffe, Kai W. Wucherpfennig, Jun Qi, X. Shirley Liu, Henry Long, Myles Brown, Jason S. Carroll, Joan S. Brugge, James Bradner, Franziska Michor, Kornelia Polyak
Mol Cell. Author manuscript; available in PMC 2021 Jun 18.
Published in final edited form as: Mol Cell. 2020 Jun 18; 78(6): 1096–1113.e8. Published online 2020 May 15. doi: 10.1016/j.molcel.2020.04.027
PMCID:
PMC7306005
AbstractArticlePDF–3.2M
15.
ERCC1–XPF targeting to psoralen–DNA crosslinks depends on XPA and FANCD2
Mariangela Sabatella, Alex Pines, Jana Slyskova, Wim Vermeulen, Hannes Lans
Cell Mol Life Sci. 2020 May; 77(10): 2005–2016. Published online 2019 Aug 7. doi: 10.1007/s00018-019-03264-5
PMCID:
PMC7228994
AbstractArticlePDF–1.5M
16.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
17.
ARIH2 is a Vif-dependent regulator of CUL5-mediated APOBEC3G degradation in HIV infection
Ruth Hüttenhain, Jiewei Xu, Lily A. Burton, David E. Gordon, Judd F. Hultquist, Jeffrey R. Johnson, Laura Satkamp, Joseph Hiatt, David Y. Rhee, Kheewoong Baek, David C. Crosby, Alan D. Frankel, Alexander Marson, J. Wade Harper, Arno F. Alpi, Brenda A. Schulman, John D. Gross, Nevan J. Krogan
Cell Host Microbe. Author manuscript; available in PMC 2020 Jul 10.
Published in final edited form as: Cell Host Microbe. 2019 Jul 10; 26(1): 86–99.e7. Published online 2019 Jun 25. doi: 10.1016/j.chom.2019.05.008
PMCID:
PMC7153695
AbstractArticlePDF–2.6M
18.
XPA: DNA Repair Protein of Significant Clinical Importance
Lucia Borszéková Pulzová, Thomas A. Ward, Miroslav Chovanec
Int J Mol Sci. 2020 Mar; 21(6): 2182. Published online 2020 Mar 22. doi: 10.3390/ijms21062182
PMCID:
PMC7139726
AbstractArticlePDF–1.1M
19.
A key interaction with RPA orients XPA in NER complexes
Agnieszka M Topolska-Woś, Norie Sugitani, John J Cordoba, Kateryna V Le Meur, Rémy A Le Meur, Hyun Suk Kim, Jung-Eun Yeo, Daniel Rosenberg, Michal Hammel, Orlando D Schärer, Walter J Chazin
Nucleic Acids Res. 2020 Feb 28; 48(4): 2173–2188. Published online 2020 Jan 11. doi: 10.1093/nar/gkz1231
PMCID:
PMC7038936
AbstractArticlePDF–4.8M
20.
Increased levels of XPA might be the basis of cisplatin resistance in germ cell tumours
Zuzana Cierna, Vera Miskovska, Jan Roska, Dana Jurkovicova, Lucia Borszekova Pulzova, Zuzana Sestakova, Lenka Hurbanova, Katarina Machalekova, Michal Chovanec, Katarina Rejlekova, Daniela Svetlovska, Katarina Kalavska, Karol Kajo, Pavel Babal, Jozef Mardiak, Thomas A. Ward, Michal Mego, Miroslav Chovanec
BMC Cancer. 2020; 20: 17. Published online 2020 Jan 6. doi: 10.1186/s12885-019-6496-1
PMCID:
PMC6945513
AbstractArticlePDF–1.0M

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