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Items: 14

1.
Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations
Robert Fragoza, Jishnu Das, Shayne D. Wierbowski, Jin Liang, Tina N. Tran, Siqi Liang, Juan F. Beltran, Christen A. Rivera-Erick, Kaixiong Ye, Ting-Yi Wang, Li Yao, Matthew Mort, Peter D. Stenson, David N. Cooper, Xiaomu Wei, Alon Keinan, John C. Schimenti, Andrew G. Clark, Haiyuan Yu
Nat Commun. 2019; 10: 4141. Published online 2019 Sep 12. doi: 10.1038/s41467-019-11959-3
PMCID:
PMC6742646
AbstractArticlePDF–1.2M
2.
Widespread expansion of protein interaction capabilities by alternative splicing
Xinping Yang, Jasmin Coulombe-Huntington, Shuli Kang, Gloria M. Sheynkman, Tong Hao, Aaron Richardson, Song Sun, Fan Yang, Yun A. Shen, Ryan R. Murray, Kerstin Spirohn, Bridget E. Begg, Miquel Duran-Frigola, Andrew MacWilliams, Samuel J. Pevzner, Quan Zhong, Shelly A. Wanamaker, Stanley Tam, Lila Ghamsari, Nidhi Sahni, Song Yi, Maria D. Rodriguez, Dawit Balcha, Guihong Tan, Michael Costanzo, Brenda Andrews, Charles Boone, Xianghong J. Zhou, Kourosh Salehi-Ashtiani, Benoit Charloteaux, Alyce A. Chen, Michael A. Calderwood, Patrick Aloy, Frederick P. Roth, David E. Hill, Lilia M. Iakoucheva, Yu Xia, Marc Vidal
Cell. Author manuscript; available in PMC 2017 Feb 11.
Published in final edited form as: Cell. 2016 Feb 11; 164(4): 805–817. doi: 10.1016/j.cell.2016.01.029
PMCID:
PMC4882190
AbstractArticlePDF–1.9M
3.
A proteome-scale map of the human interactome network
Thomas Rolland, Murat Taşan, Benoit Charloteaux, Samuel J. Pevzner, Quan Zhong, Nidhi Sahni, Song Yi, Irma Lemmens, Celia Fontanillo, Roberto Mosca, Atanas Kamburov, Susan D. Ghiassian, Xinping Yang, Lila Ghamsari, Dawit Balcha, Bridget E. Begg, Pascal Braun, Marc Brehme, Martin P. Broly, Anne-Ruxandra Carvunis, Dan Convery-Zupan, Roser Corominas, Jasmin Coulombe-Huntington, Elizabeth Dann, Matija Dreze, Amélie Dricot, Changyu Fan, Eric Franzosa, Fana Gebreab, Bryan J. Gutierrez, Madeleine F. Hardy, Mike Jin, Shuli Kang, Ruth Kiros, Guan Ning Lin, Katja Luck, Andrew MacWilliams, Jörg Menche, Ryan R. Murray, Alexandre Palagi, Matthew M. Poulin, Xavier Rambout, John Rasla, Patrick Reichert, Viviana Romero, Elien Ruyssinck, Julie M. Sahalie, Annemarie Scholz, Akash A. Shah, Amitabh Sharma, Yun Shen, Kerstin Spirohn, Stanley Tam, Alexander O. Tejeda, Shelly A. Wanamaker, Jean-Claude Twizere, Kerwin Vega, Jennifer Walsh, Michael E. Cusick, Yu Xia, Albert-László Barabási, Lilia M. Iakoucheva, Patrick Aloy, Javier De Las Rivas, Jan Tavernier, Michael A. Calderwood, David E. Hill, Tong Hao, Frederick P. Roth, Marc Vidal
Cell. Author manuscript; available in PMC 2015 Nov 20.
Published in final edited form as: Cell. 2014 Nov 20; 159(5): 1212–1226. doi: 10.1016/j.cell.2014.10.050
PMCID:
PMC4266588
AbstractArticlePDF–3.1M
4.
Caspase-2 is essential for c-Jun transcriptional activation and Bim induction in neuron death
Ying Y. Jean, Elena M. Ribe, Maria Elena Pero, Marina Moskalenko, Zarah Iqbal, Lianna J. Marks, Lloyd A. Greene, Carol M. Troy
Biochem J. Author manuscript; available in PMC 2014 Oct 1.
Published in final edited form as: Biochem J. 2013 Oct 1; 455(1): 15–25. doi: 10.1042/BJ20130556
PMCID:
PMC3905453
AbstractArticlePDF–2.7M
5.
Caspase-2 Is Upregulated after Sciatic Nerve Transection and Its Inhibition Protects Dorsal Root Ganglion Neurons from Apoptosis after Serum Withdrawal
Vasanthy Vigneswara, Martin Berry, Ann Logan, Zubair Ahmed
PLoS One. 2013; 8(2): e57861. Published online 2013 Feb 25. doi: 10.1371/journal.pone.0057861
PMCID:
PMC3581492
AbstractArticlePDF–2.4M
6.
Caspase-2 is an initiator caspase responsible for pore-forming toxin-mediated apoptosis
Gergely Imre, Jan Heering, Armelle-Natsuo Takeda, Matthias Husmann, Bernd Thiede, Dagmar Meyer zu Heringdorf, Douglas R Green, F Gisou van der Goot, Bhanu Sinha, Volker Dötsch, Krishnaraj Rajalingam
EMBO J. 2012 May 30; 31(11): 2615–2628. Published online 2012 Apr 24. doi: 10.1038/emboj.2012.93
PMCID:
PMC3365430
AbstractArticlePDF–2.9M
7.
Oncogenic ras-induced Down-regulation of Pro-apoptotic Protease Caspase-2 Is Required for Malignant Transformation of Intestinal Epithelial Cells
Byong Hoon Yoo, Yanfei Wang, Mete Erdogan, Takehiko Sasazuki, Senji Shirasawa, Laurent Corcos, Kanaga Sabapathy, Kirill V. Rosen
J Biol Chem. 2011 Nov 11; 286(45): 38894–38903. Published online 2011 Sep 8. doi: 10.1074/jbc.M111.290692
PMCID:
PMC3234714
AbstractArticlePDF–1.3M
8.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
9.
Ocular neuroprotection by siRNA targeting caspase-2
Z Ahmed, H Kalinski, M Berry, M Almasieh, H Ashush, N Slager, A Brafman, I Spivak, N Prasad, I Mett, E Shalom, E Alpert, A Di Polo, E Feinstein, A Logan
Cell Death Dis. 2011 Jun; 2(6): e173. Published online 2011 Jun 16. doi: 10.1038/cddis.2011.54
PMCID:
PMC3168996
AbstractArticlePDF–627K
10.
Caspase-2-mediated cleavage of Mdm2 creates p53-induced positive feedback loop
Trudy G. Oliver, Etienne Meylan, Gregory P. Chang, Wen Xue, James R. Burke, Timothy J. Humpton, Diana Hubbard, Arjun Bhutkar, Tyler Jacks
Mol Cell. Author manuscript; available in PMC 2012 Jan 8.
Published in final edited form as: Mol Cell. 2011 Jul 8; 43(1): 57–71. doi: 10.1016/j.molcel.2011.06.012
PMCID:
PMC3160283
AbstractArticlePDF–1.5M
11.
Role of Caspase 2 in Apoptotic Signaling in Primate and Murine Germ Cells
Candace Johnson, Yue Jia, Christina Wang, Yan-He Lue, Ronald S. Swerdloff, Xue-Shen Zhang, Zhao-Yuan Hu, Yin-Chuan Li, Yi-Xun Liu, Amiya P. Sinha Hikim
Biol Reprod. 2008 Nov; 79(5): 806–814. Prepublished online 2008 Jul 9. doi: 10.1095/biolreprod.108.068833
PMCID:
PMC2715000
AbstractArticlePDF–5.7M
12.
Expression of the Bcl-2 Protein BAD Promotes Prostate Cancer Growth
Adrienne J. Smith, Yelena Karpova, Ralph D'Agostino, Jr, Mark Willingham, George Kulik
PLoS One. 2009; 4(7): e6224. Published online 2009 Jul 13. doi: 10.1371/journal.pone.0006224
PMCID:
PMC2704953
AbstractArticlePDF–919K
13.
PAX2 Suppresses Apoptosis in Renal Collecting Duct Cells
Elena Torban, Michael Roger Eccles, Jack Favor, Paul Rowland Goodyer
Am J Pathol. 2000 Sep; 157(3): 833–842. doi: 10.1016/S0002-9440(10)64597-X
PMCID:
PMC1885702
AbstractArticlePDF–1.0M
14.
Apoptosis caused by p53-induced protein with death domain (PIDD) depends on the death adapter protein RAIDD
Christina Berube, Louis-Martin Boucher, Weili Ma, Andrew Wakeham, Leonardo Salmena, Razqallah Hakem, Wen-Chen Yeh, Tak W. Mak, Samuel Benchimol
Proc Natl Acad Sci U S A. 2005 Oct 4; 102(40): 14314–14320. Published online 2005 Sep 23. doi: 10.1073/pnas.0506475102
PMCID:
PMC1242316
AbstractArticlePDF–507K

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