PMC Links for GEO Profiles (Select 132451139) - PMC

Select item 95262561.

A standardized nomenclature for mammalian histone genes

Ruth L. Seal, Paul Denny, Elspeth A. Bruford, Anna K. Gribkova, David Landsman, William F. Marzluff, Monica McAndrews, Anna R. Panchenko, Alexey K. Shaytan, Paul B. Talbert

Epigenetics Chromatin. 2022; 15: 34. Published online 2022 Oct 1. doi: 10.1186/s13072-022-00467-2

PMCID:: PMC9526256

Abstract Article PDF–1.1M

Select item 83396732.

H2A.B is a cancer/testis factor involved in the activation of ribosome biogenesis in Hodgkin lymphoma

Xuanzhao Jiang, Jiayu Wen, Elizabeth Paver, Yu‐Huan Wu, Gege Sun, Amanda Bullman, Jane E Dahlstrom, David J Tremethick, Tatiana A Soboleva

EMBO Rep. 2021 Aug 4; 22(8): e52462. Published online 2021 Jul 19. doi: 10.15252/embr.202152462

PMCID:: PMC8339673

Abstract Article PDF–4.4M

Select item 81650303.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 77801454.

Structural basis of nucleosome dynamics modulation by histone variants H2A.B and H2A.Z.2.2

Min Zhou, Linchang Dai, Chengmin Li, Liuxin Shi, Yan Huang, Zhenqian Guo, Fei Wu, Ping Zhu, Zheng Zhou

EMBO J. 2021 Jan 4; 40(1): e105907. Published online 2020 Oct 19. doi: 10.15252/embj.2020105907

PMCID:: PMC7780145

Abstract Article PDF–3.5M

Select item 58802375.

Evolutionary origins and diversification of testis-specific short histone H2A variants in mammals

Antoine Molaro, Janet M. Young, Harmit S. Malik

Genome Res. 2018 Apr; 28(4): 460–473. doi: 10.1101/gr.229799.117

PMCID:: PMC5880237

Abstract Article PDF–5.1M

Select item 45128536.

Nucleosome adaptability conferred by sequence and structural variations in histone H2A-H2B dimers

Alexey K. Shaytan, David Landsman, Anna R. Panchenko

Curr Opin Struct Biol. Author manuscript; available in PMC 2016 Jun 1.

Published in final edited form as: Curr Opin Struct Biol. 2015 Jun; 32: 48–57. Published online 2015 Feb 27. doi: 10.1016/j.sbi.2015.02.004

PMCID:: PMC4512853

Abstract Article PDF–1.3M

Select item 37084787.

Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells

Michael Y. Tolstorukov, Joseph A. Goldman, Cristele Gilbert, Vasily Ogryzko, Robert E. Kingston, Peter J. Park

Mol Cell. Author manuscript; available in PMC 2013 Aug 24.

Published in final edited form as: Mol Cell. 2012 Aug 24; 47(4): 596–607. Published online 2012 Jul 12. doi: 10.1016/j.molcel.2012.06.011

PMCID:: PMC3708478

Abstract Article PDF–3.9M

Select item 35104948.

Histone H2A variants in nucleosomes and chromatin: more or less stable?

Clemens Bönisch, Sandra B. Hake

Nucleic Acids Res. 2012 Nov; 40(21): 10719–10741. Published online 2012 Sep 21. doi: 10.1093/nar/gks865

PMCID:: PMC3510494

Abstract Article PDF–2.8M

Select item 31780599.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 229306110.

Epstein-Barr Virus Immediate-Early Protein Zta Co-Opts Mitochondrial Single-Stranded DNA Binding Protein To Promote Viral and Inhibit Mitochondrial DNA Replication

Andreas Wiedmer, Pu Wang, Jing Zhou, Andrew J. Rennekamp, Valeria Tiranti, Massimo Zeviani, Paul M. Lieberman

J Virol. 2008 May; 82(9): 4647–4655. Published online 2008 Feb 27. doi: 10.1128/JVI.02198-07

PMCID:: PMC2293061

Abstract Article PDF–783K

Select item 219961711.

A Novel Chromatin Protein, Distantly Related to Histone H2a, Is Largely Excluded from the Inactive X Chromosome

Brian P. Chadwick, Huntington F. Willard

J Cell Biol. 2001 Jan 22; 152(2): 375–384. doi: 10.1083/jcb.152.2.375

PMCID:: PMC2199617

Abstract Article PDF–419K

Select item 51450012.

Nucleosomes containing the histone variant H2A.Bbd organize only 118 base pairs of DNA

Yunhe Bao, Kasey Konesky, Young-Jun Park, Simona Rosu, Pamela N Dyer, Danny Rangasamy, David J Tremethick, Paul J Laybourn, Karolin Luger

EMBO J. 2004 Aug 18; 23(16): 3314–3324. Published online 2004 Jul 15. doi: 10.1038/sj.emboj.7600316

PMCID:: PMC514500

Abstract Article PDF–450K

Select item 13924113.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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