PMC Links for GEO Profiles (Select 28710839) - PMC

Select item 67426461.

Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations

Robert Fragoza, Jishnu Das, Shayne D. Wierbowski, Jin Liang, Tina N. Tran, Siqi Liang, Juan F. Beltran, Christen A. Rivera-Erick, Kaixiong Ye, Ting-Yi Wang, Li Yao, Matthew Mort, Peter D. Stenson, David N. Cooper, Xiaomu Wei, Alon Keinan, John C. Schimenti, Andrew G. Clark, Haiyuan Yu

Nat Commun. 2019; 10: 4141. Published online 2019 Sep 12. doi: 10.1038/s41467-019-11959-3

PMCID:: PMC6742646

Abstract Article PDF–1.2M

Select item 48821902.

Widespread expansion of protein interaction capabilities by alternative splicing

Xinping Yang, Jasmin Coulombe-Huntington, Shuli Kang, Gloria M. Sheynkman, Tong Hao, Aaron Richardson, Song Sun, Fan Yang, Yun A. Shen, Ryan R. Murray, Kerstin Spirohn, Bridget E. Begg, Miquel Duran-Frigola, Andrew MacWilliams, Samuel J. Pevzner, Quan Zhong, Shelly A. Wanamaker, Stanley Tam, Lila Ghamsari, Nidhi Sahni, Song Yi, Maria D. Rodriguez, Dawit Balcha, Guihong Tan, Michael Costanzo, Brenda Andrews, Charles Boone, Xianghong J. Zhou, Kourosh Salehi-Ashtiani, Benoit Charloteaux, Alyce A. Chen, Michael A. Calderwood, Patrick Aloy, Frederick P. Roth, David E. Hill, Lilia M. Iakoucheva, Yu Xia, Marc Vidal

Cell. Author manuscript; available in PMC 2017 Feb 11.

Published in final edited form as: Cell. 2016 Feb 11; 164(4): 805–817. doi: 10.1016/j.cell.2016.01.029

PMCID:: PMC4882190

Abstract Article PDF–1.9M

Select item 42665883.

A proteome-scale map of the human interactome network

Thomas Rolland, Murat Taşan, Benoit Charloteaux, Samuel J. Pevzner, Quan Zhong, Nidhi Sahni, Song Yi, Irma Lemmens, Celia Fontanillo, Roberto Mosca, Atanas Kamburov, Susan D. Ghiassian, Xinping Yang, Lila Ghamsari, Dawit Balcha, Bridget E. Begg, Pascal Braun, Marc Brehme, Martin P. Broly, Anne-Ruxandra Carvunis, Dan Convery-Zupan, Roser Corominas, Jasmin Coulombe-Huntington, Elizabeth Dann, Matija Dreze, Amélie Dricot, Changyu Fan, Eric Franzosa, Fana Gebreab, Bryan J. Gutierrez, Madeleine F. Hardy, Mike Jin, Shuli Kang, Ruth Kiros, Guan Ning Lin, Katja Luck, Andrew MacWilliams, Jörg Menche, Ryan R. Murray, Alexandre Palagi, Matthew M. Poulin, Xavier Rambout, John Rasla, Patrick Reichert, Viviana Romero, Elien Ruyssinck, Julie M. Sahalie, Annemarie Scholz, Akash A. Shah, Amitabh Sharma, Yun Shen, Kerstin Spirohn, Stanley Tam, Alexander O. Tejeda, Shelly A. Wanamaker, Jean-Claude Twizere, Kerwin Vega, Jennifer Walsh, Michael E. Cusick, Yu Xia, Albert-László Barabási, Lilia M. Iakoucheva, Patrick Aloy, Javier De Las Rivas, Jan Tavernier, Michael A. Calderwood, David E. Hill, Tong Hao, Frederick P. Roth, Marc Vidal

Cell. Author manuscript; available in PMC 2015 Nov 20.

Published in final edited form as: Cell. 2014 Nov 20; 159(5): 1212–1226. doi: 10.1016/j.cell.2014.10.050

PMCID:: PMC4266588

Abstract Article PDF–3.1M

Select item 39054534.

Caspase-2 is essential for c-Jun transcriptional activation and Bim induction in neuron death

Ying Y. Jean, Elena M. Ribe, Maria Elena Pero, Marina Moskalenko, Zarah Iqbal, Lianna J. Marks, Lloyd A. Greene, Carol M. Troy

Biochem J. Author manuscript; available in PMC 2014 Oct 1.

Published in final edited form as: Biochem J. 2013 Oct 1; 455(1): 15–25. doi: 10.1042/BJ20130556

PMCID:: PMC3905453

Abstract Article PDF–2.7M

Select item 35814925.

Caspase-2 Is Upregulated after Sciatic Nerve Transection and Its Inhibition Protects Dorsal Root Ganglion Neurons from Apoptosis after Serum Withdrawal

Vasanthy Vigneswara, Martin Berry, Ann Logan, Zubair Ahmed

PLoS One. 2013; 8(2): e57861. Published online 2013 Feb 25. doi: 10.1371/journal.pone.0057861

PMCID:: PMC3581492

Abstract Article PDF–2.4M

Select item 33654306.

Caspase-2 is an initiator caspase responsible for pore-forming toxin-mediated apoptosis

Gergely Imre, Jan Heering, Armelle-Natsuo Takeda, Matthias Husmann, Bernd Thiede, Dagmar Meyer zu Heringdorf, Douglas R Green, F Gisou van der Goot, Bhanu Sinha, Volker Dötsch, Krishnaraj Rajalingam

EMBO J. 2012 May 30; 31(11): 2615–2628. Published online 2012 Apr 24. doi: 10.1038/emboj.2012.93

PMCID:: PMC3365430

Abstract Article PDF–2.9M

Select item 32347147.

Oncogenic ras-induced Down-regulation of Pro-apoptotic Protease Caspase-2 Is Required for Malignant Transformation of Intestinal Epithelial Cells

Byong Hoon Yoo, Yanfei Wang, Mete Erdogan, Takehiko Sasazuki, Senji Shirasawa, Laurent Corcos, Kanaga Sabapathy, Kirill V. Rosen

J Biol Chem. 2011 Nov 11; 286(45): 38894–38903. Published online 2011 Sep 8. doi: 10.1074/jbc.M111.290692

PMCID:: PMC3234714

Abstract Article PDF–1.3M

Select item 31780598.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 31689969.

Ocular neuroprotection by siRNA targeting caspase-2

Z Ahmed, H Kalinski, M Berry, M Almasieh, H Ashush, N Slager, A Brafman, I Spivak, N Prasad, I Mett, E Shalom, E Alpert, A Di Polo, E Feinstein, A Logan

Cell Death Dis. 2011 Jun; 2(6): e173. Published online 2011 Jun 16. doi: 10.1038/cddis.2011.54

PMCID:: PMC3168996

Abstract Article PDF–627K

Select item 316028310.

Caspase-2-mediated cleavage of Mdm2 creates p53-induced positive feedback loop

Trudy G. Oliver, Etienne Meylan, Gregory P. Chang, Wen Xue, James R. Burke, Timothy J. Humpton, Diana Hubbard, Arjun Bhutkar, Tyler Jacks

Mol Cell. Author manuscript; available in PMC 2012 Jan 8.

Published in final edited form as: Mol Cell. 2011 Jul 8; 43(1): 57–71. doi: 10.1016/j.molcel.2011.06.012

PMCID:: PMC3160283

Abstract Article PDF–1.5M

Select item 271500011.

Role of Caspase 2 in Apoptotic Signaling in Primate and Murine Germ Cells

Candace Johnson, Yue Jia, Christina Wang, Yan-He Lue, Ronald S. Swerdloff, Xue-Shen Zhang, Zhao-Yuan Hu, Yin-Chuan Li, Yi-Xun Liu, Amiya P. Sinha Hikim

Biol Reprod. 2008 Nov; 79(5): 806–814. Prepublished online 2008 Jul 9. doi: 10.1095/biolreprod.108.068833

PMCID:: PMC2715000

Abstract Article PDF–5.7M

Select item 270495312.

Expression of the Bcl-2 Protein BAD Promotes Prostate Cancer Growth

Adrienne J. Smith, Yelena Karpova, Ralph D'Agostino, Jr, Mark Willingham, George Kulik

PLoS One. 2009; 4(7): e6224. Published online 2009 Jul 13. doi: 10.1371/journal.pone.0006224

PMCID:: PMC2704953

Abstract Article PDF–919K

Select item 188570213.

PAX2 Suppresses Apoptosis in Renal Collecting Duct Cells

Elena Torban, Michael Roger Eccles, Jack Favor, Paul Rowland Goodyer

Am J Pathol. 2000 Sep; 157(3): 833–842. doi: 10.1016/S0002-9440(10)64597-X

PMCID:: PMC1885702

Abstract Article PDF–1.0M

Select item 124231614.

Apoptosis caused by p53-induced protein with death domain (PIDD) depends on the death adapter protein RAIDD

Christina Berube, Louis-Martin Boucher, Weili Ma, Andrew Wakeham, Leonardo Salmena, Razqallah Hakem, Wen-Chen Yeh, Tak W. Mak, Samuel Benchimol

Proc Natl Acad Sci U S A. 2005 Oct 4; 102(40): 14314–14320. Published online 2005 Sep 23. doi: 10.1073/pnas.0506475102

PMCID:: PMC1242316

Abstract Article PDF–507K

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