PMC Links for GEO Profiles (Select 38530802) - PMC

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Links from GEO Profiles

Items: 10

Select item 48228301.

Loss of 5-Hydroxymethylcytosine Is an Independent Unfavorable Prognostic Factor for Esophageal Squamous Cell Carcinoma

Xuejiao Shi, Yue Yu, Mei Luo, Zhirong Zhang, Susheng Shi, Xiaoli Feng, Zhaoli Chen, Jie He

PLoS One. 2016; 11(4): e0153100. Published online 2016 Apr 6. doi: 10.1371/journal.pone.0153100

PMCID:: PMC4822830

Abstract Article PDF–1.2M

Select item 41980242.

Playing TETris with DNA modifications

Benjamin Delatte, Rachel Deplus, François Fuks

EMBO J. 2014 Jun 2; 33(11): 1198–1211. Published online 2014 May 13. doi: 10.15252/embj.201488290

PMCID:: PMC4198024

Abstract Article PDF–787K

Select item 36853283.

ZF-CxxC domain-containing proteins, CpG islands and the chromatin connection

Hannah K. Long, Neil P. Blackledge, Robert J. Klose

Biochem Soc Trans. 2013 Jun 1; 41(Pt 3): 727–740. Published online 2013 May 23. doi: 10.1042/BST20130028

PMCID:: PMC3685328

Abstract Article PDF–1.4M

Select item 36539094.

Intrinsic and Extrinsic Connections of Tet3 Dioxygenase with CXXC Zinc Finger Modules

Nan Liu, Mengxi Wang, Wen Deng, Christine S. Schmidt, Weihua Qin, Heinrich Leonhardt, Fabio Spada

PLoS One. 2013; 8(5): e62755. Published online 2013 May 14. doi: 10.1371/journal.pone.0062755

PMCID:: PMC3653909

Abstract Article PDF–1.0M

Select item 35909845.

TET2 and TET3 regulate GlcNAcylation and H3K4 methylation through OGT and SET1/COMPASS

Rachel Deplus, Benjamin Delatte, Marie K Schwinn, Matthieu Defrance, Jacqui Méndez, Nancy Murphy, Mark A Dawson, Michael Volkmar, Pascale Putmans, Emilie Calonne, Alan H Shih, Ross L Levine, Olivier Bernard, Thomas Mercher, Eric Solary, Marjeta Urh, Danette L Daniels, François Fuks

EMBO J. 2013 Mar 6; 32(5): 645–655. Published online 2013 Jan 25. doi: 10.1038/emboj.2012.357

PMCID:: PMC3590984

Abstract Article PDF–1.7M

Select item 34952466.

Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine

Shinsuke Ito, Li Shen, Qing Dai, Susan C. Wu, Leonard B. Collins, James A. Swenberg, Chuan He, Yi Zhang

Science. Author manuscript; available in PMC 2012 Nov 12.

Published in final edited form as: Science. 2011 Sep 2; 333(6047): 1300–1303. Published online 2011 Jul 21. doi: 10.1126/science.1210597

PMCID:: PMC3495246

Abstract Article PDF–3.4M

Select item 34915677.

Role of Tet proteins in 5mC to 5hmC conversion, ES cell self-renewal, and ICM specification

Shinsuke Ito, Ana C. D’Alessio, Olena V. Taranova, Kwonho Hong, Lawrence C. Sowers, Yi Zhang

Nature. Author manuscript; available in PMC 2012 Nov 7.

Published in final edited form as: Nature. 2010 Aug 26; 466(7310): 1129–1133. doi: 10.1038/nature09303

PMCID:: PMC3491567

Abstract Article PDF–6.0M

Select item 31780598.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 30481229.

Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine

Khursheed Iqbal, Seung-Gi Jin, Gerd P. Pfeifer, Piroska E. Szabó

Proc Natl Acad Sci U S A. 2011 Mar 1; 108(9): 3642–3647. Published online 2011 Feb 14. doi: 10.1073/pnas.1014033108

PMCID:: PMC3048122

Abstract Article PDF–861K

Select item 271501510.

Conversion of 5-Methylcytosine to 5-Hydroxymethylcytosine in Mammalian DNA by MLL Partner TET1

Mamta Tahiliani, Kian Peng Koh, Yinghua Shen, William A. Pastor, Hozefa Bandukwala, Yevgeny Brudno, Suneet Agarwal, Lakshminarayan M. Iyer, David R. Liu, L. Aravind, Anjana Rao

Science. Author manuscript; available in PMC 2009 Jul 24.

Published in final edited form as: Science. 2009 May 15; 324(5929): 930–935. Published online 2009 Apr 16. doi: 10.1126/science.1170116