PMC Links for GEO Profiles (Select 40682562) - PMC

Select item 67426461.

Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations

Robert Fragoza, Jishnu Das, Shayne D. Wierbowski, Jin Liang, Tina N. Tran, Siqi Liang, Juan F. Beltran, Christen A. Rivera-Erick, Kaixiong Ye, Ting-Yi Wang, Li Yao, Matthew Mort, Peter D. Stenson, David N. Cooper, Xiaomu Wei, Alon Keinan, John C. Schimenti, Andrew G. Clark, Haiyuan Yu

Nat Commun. 2019; 10: 4141. Published online 2019 Sep 12. doi: 10.1038/s41467-019-11959-3

PMCID:: PMC6742646

Abstract Article PDF–1.2M

Select item 45873272.

Sequential Elution Interactome Analysis of the Mind Bomb 1 Ubiquitin Ligase Reveals a Novel Role in Dendritic Spine Outgrowth

Joseph Mertz, Haiyan Tan, Vishwajeeth Pagala, Bing Bai, Ping-Chung Chen, Yuxin Li, Ji-Hoon Cho, Timothy Shaw, Xusheng Wang, Junmin Peng

Mol Cell Proteomics. 2015 Jul; 14(7): 1898–1910. Published online 2015 Apr 30. doi: 10.1074/mcp.M114.045898

PMCID:: PMC4587327

Abstract Article PDF–2.6M

Select item 41082803.

DNA Methylation Is Associated with Altered Gene Expression in AMD

Allan Hunter, Paul A. Spechler, Alyssa Cwanger, Ying Song, Zhe Zhang, Gui-shuang Ying, Anna K. Hunter, Edwin deZoeten, Joshua L. Dunaief

Invest Ophthalmol Vis Sci. 2012 Apr; 53(4): 2089–2105. Published online 2012 Apr 24. doi: 10.1167/iovs.11-8449

PMCID:: PMC4108280

Abstract Article PDF–654K

Select item 37735054.

In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine

Simona Principe, E. Ellen Jones, Yunee Kim, Ankit Sinha, Julius O. Nyalwidhe, Jasmin Brooks, O. John Semmes, Dean A. Troyer, Raymond S. Lance, Thomas Kislinger, Richard R. Drake

Proteomics. Author manuscript; available in PMC 2014 May 1.

Published in final edited form as: Proteomics. 2013 May; 13(0): 1667–1671. Published online 2013 Apr 23. doi: 10.1002/pmic.201200561

PMCID:: PMC3773505

Abstract Article PDF–630K

Select item 34786065.

Impact of lactobacilli on orally acquired listeriosis

Cristel Archambaud, Marie-Anne Nahori, Guillaume Soubigou, Christophe Bécavin, Laure Laval, Pierre Lechat, Tamara Smokvina, Philippe Langella, Marc Lecuit, Pascale Cossart

Proc Natl Acad Sci U S A. 2012 Oct 9; 109(41): 16684–16689. Published online 2012 Sep 24. doi: 10.1073/pnas.1212809109

PMCID:: PMC3478606

Abstract Article PDF–772K

Select item 31883886.

Leveraging the power of next-generation sequencing to generate interactome datasets

Haiyuan Yu, Leah Tardivo, Stanley Tam, Evan Weiner, Fana Gebreab, Changyu Fan, Nenad Svrzikapa, Tomoko Hirozane-Kishikawa, Edward Rietman, Xinping Yang, Julie Sahalie, Kourosh Salehi-Ashtiani, Tong Hao, Michael E. Cusick, David E. Hill, Frederick P. Roth, Pascal Braun, Marc Vidal

Nat Methods. Author manuscript; available in PMC 2011 Dec 1.

Published in final edited form as: Nat Methods. 2011 Jun; 8(6): 478–480. Published online 2011 Apr 24. doi: 10.1038/nmeth.1597

PMCID:: PMC3188388

Abstract Article PDF–932K

Select item 31780597.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 28725618.

An empirical framework for binary interactome mapping

Kavitha Venkatesan, Jean-François Rual, Alexei Vazquez, Ulrich Stelzl, Irma Lemmens, Tomoko Hirozane-Kishikawa, Tong Hao, Martina Zenkner, Xiaofeng Xin, Kwang-II Goh, Muhammed A Yildirim, Nicolas Simonis, Kathrin Heinzmann, Fana Gebreab, Julie M Sahalie, Sebiha Cevik, Christophe Simon, Anne-Sophie de Smet, Elizabeth Dann, Alex Smolyar, Arunachalam Vinayagam, Haiyuan Yu, David Szeto, Heather Borick, Amélie Dricot, Niels Klitgord, Ryan R Murray, Chenwei Lin, Maciej Lalowski, Jan Timm, Kirstin Rau, Charles Boone, Pascal Braun, Michael E Cusick, Frederick P Roth, David E Hill, Jan Tavernier, Erich E Wanker, Albert-László Barabási, Marc Vidal

Nat Methods. Author manuscript; available in PMC 2010 May 18.

Published in final edited form as: Nat Methods. 2009 Jan; 6(1): 83–90. Published online 2008 Dec 7. doi: 10.1038/nmeth.1280

PMCID:: PMC2872561

Abstract Article PDF–1.0M

Select item 28251699.

Molecular Complex of Three Testis-Specific Isozymes Associated with the Mouse Sperm Fibrous Sheath: Hexokinase 1, Phosphofructokinase M, and Glutathione S-Transferase mu class 5

Noriko Nakamura, Chisato Mori, Edward M. Eddy

Biol Reprod. 2010 Mar; 82(3): 504–515. Published online 2009 Nov 4. doi: 10.1095/biolreprod.109.080580

PMCID:: PMC2825169

Abstract Article PDF–3.1M

Select item 274618910.

Expression profiling identifies genes involved in emphysema severity

Santiyagu M Savarimuthu Francis, Jill E Larsen, Sandra J Pavey, Rayleen V Bowman, Nicholas K Hayward, Kwun M Fong, Ian A Yang

Respir Res. 2009; 10(1): 81. Published online 2009 Sep 2. doi: 10.1186/1465-9921-10-81

PMCID:: PMC2746189

Abstract Article PDF–484K

Select item 187193711.

Variation in genes relevant to aromatic hydrocarbon metabolism and the risk of adult brain tumors

Anneclaire J. De Roos, Nathaniel Rothman, Merideth Brown, Douglas A. Bell, Gary S. Pittman, William R. Shapiro, Robert G. Selker, Howard A. Fine, Peter M. Black, Peter D. Inskip

Neuro-oncol. 2006 Apr; 8(2): 145–155. doi: 10.1215/15228517-2005-003

PMCID:: PMC1871937

Abstract Article PDF–193K

Select item 113446412.

Molecular cloning and heterologous expression of an alternatively spliced human Mu class glutathione S-transferase transcript.

V L Ross, P G Board

Biochem J. 1993 Sep 1; 294(Pt 2): 373–380. doi: 10.1042/bj2940373

PMCID:: PMC1134464

Summary Page Browse PDF–1.7M

Select item 14834713.

Combining SSH and cDNA microarrays for rapid identification of differentially expressed genes.

G P Yang, D T Ross, W W Kuang, P O Brown, R J Weigel

Nucleic Acids Res. 1999 Mar 15; 27(6): 1517–1523. doi: 10.1093/nar/27.6.1517

PMCID:: PMC148347

Summary PDF–910K

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