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Items: 1 to 20 of 21

1.
Structural dissection of an interaction between transcription initiation and termination factors implicated in promoter-terminator cross-talk
Matthew Bratkowski, Ilona Christy Unarta, Lizhe Zhu, Murtada Shubbar, Xuhui Huang, Xin Liu
J Biol Chem. 2018 Feb 2; 293(5): 1651–1665. Published online 2017 Nov 20. doi: 10.1074/jbc.M117.811521
PMCID:
PMC5798296
AbstractArticlePDF–3.6M
2.
Near-atomic resolution visualization of human transcription promoter opening
Yuan He, Chunli Yan, Jie Fang, Carla Inouye, Robert Tjian, Ivaylo Ivanov, Eva Nogales
Nature. Author manuscript; available in PMC 2016 Nov 19.
Published in final edited form as: Nature. 2016 May 19; 533(7603): 359–365. Published online 2016 May 11. doi: 10.1038/nature17970
PMCID:
PMC4940141
AbstractArticlePDF–7.6M
3.
A new paradigm for transcription factor TFIIB functionality
Vladimir Gelev, Janice M. Zabolotny, Martin Lange, Makoto Hiromura, Sang Wook Yoo, Joseph S. Orlando, Anna Kushnir, Nobuo Horikoshi, Eric Paquet, Dimcho Bachvarov, Priscilla A. Schaffer, Anny Usheva
Sci Rep. 2014; 4: 3664. Published online 2014 Jan 20. doi: 10.1038/srep03664
PMCID:
PMC3895905
AbstractArticlePDF–916K
4.
Structural insights into transcription initiation by RNA polymerase II
Sebastian Grünberg, Steven Hahn
Trends Biochem Sci. Author manuscript; available in PMC 2014 Dec 1.
Published in final edited form as: Trends Biochem Sci. 2013 Dec; 38(12): 10.1016/j.tibs.2013.09.002. Published online 2013 Oct 11. doi: 10.1016/j.tibs.2013.09.002
PMCID:
PMC3843768
AbstractArticlePDF–2.2M
5.
Ablation of Rassf2 induces bone defects and subsequent haematopoietic anomalies in mice
Hoogeun Song, Hyunsoo Kim, Kyunghee Lee, Da-Hye Lee, Tae-Shin Kim, Ji Yun Song, Dongjun Lee, Dongwook Choi, Chang-Yong Ko, Han-Sung Kim, Hong-In Shin, Juhyun Choi, Heedong Park, Chankyu Park, Daewon Jeong, Dae-Sik Lim
EMBO J. 2012 Mar 7; 31(5): 1147–1159. Published online 2012 Jan 6. doi: 10.1038/emboj.2011.480
PMCID:
PMC3297990
AbstractArticlePDF–2.3M
6.
Defective transcription initiation causes postnatal growth failure in a mouse model of nucleotide excision repair (NER) progeria
Irene Kamileri, Ismene Karakasilioti, Aria Sideri, Theodoros Kosteas, Antonis Tatarakis, Iannis Talianidis, George A. Garinis
Proc Natl Acad Sci U S A. 2012 Feb 21; 109(8): 2995–3000. Published online 2012 Feb 8. doi: 10.1073/pnas.1114941109
PMCID:
PMC3286994
AbstractArticlePDF–725K
7.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
8.
Localization of TFIIB binding regions using serial analysis of chromatin occupancy
Gregory S Yochum, Veena Rajaraman, Ryan Cleland, Shannon McWeeney
BMC Mol Biol. 2007; 8: 102. Published online 2007 Nov 12. doi: 10.1186/1471-2199-8-102
PMCID:
PMC2211499
AbstractArticlePDF–338K
9.
Creb-Binding Protein (Cbp/P300) and RNA Polymerase II Colocalize in Transcriptionally Active Domains in the Nucleus
Anna von Mikecz, Suisheng Zhang, Marc Montminy, Eng M. Tan, Peter Hemmerich
J Cell Biol. 2000 Jul 10; 150(1): 265–274. doi: 10.1083/jcb.150.1.265
PMCID:
PMC2185550
AbstractArticlePDF–469K
10.
Structure of a (Cys3His) zinc ribbon, a ubiquitous motif in archaeal and eucaryal transcription.
H. T. Chen, P. Legault, J. Glushka, J. G. Omichinski, R. A. Scott
Protein Sci. 2000 Sep; 9(9): 1743–1752. doi: 10.1110/ps.9.9.1743
PMCID:
PMC2144703
SummaryPDF–2.5M
11.
A core promoter element downstream of the TATA box that is recognized by TFIIB
Wensheng Deng, Stefan G.E. Roberts
Genes Dev. 2005 Oct 15; 19(20): 2418–2423. doi: 10.1101/gad.342405
PMCID:
PMC1257396
AbstractArticlePDF–316K
12.
Oestrogen receptor facilitates the formation of preinitiation complex assembly: involvement of the general transcription factor TFIIB.
M Sabbah, K I Kang, L Tora, G Redeuilh
Biochem J. 1998 Dec 15; 336(Pt 3): 639–646. doi: 10.1042/bj3360639
PMCID:
PMC1219915
SummaryPDF–221K
13.
Structural basis of preinitiation complex assembly on human pol II promoters.
F T Tsai, P B Sigler
EMBO J. 2000 Jan 4; 19(1): 25–36. doi: 10.1093/emboj/19.1.25
PMCID:
PMC1171774
SummaryPDF–1.6M
14.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K
15.
Potential RNA polymerase II-induced interactions of transcription factor TFIIB.
S Malik, D K Lee, R G Roeder
Mol Cell Biol. 1993 Oct; 13(10): 6253–6259. doi: 10.1128/mcb.13.10.6253
PMCID:
PMC364684
SummaryPage BrowsePDF–1.7M
16.
New core promoter element in RNA polymerase II-dependent transcription: sequence-specific DNA binding by transcription factor IIB
Thierry Lagrange, Achillefs N. Kapanidis, Hong Tang, Danny Reinberg, Richard H. Ebright
Genes Dev. 1998 Jan 1; 12(1): 34–44. doi: 10.1101/gad.12.1.34
PMCID:
PMC316406
AbstractArticlePDF–772K
17.
RNA polymerase II initiation factor alpha from rat liver is almost identical to human TFIIB.
A Tsuboi, K Conger, K P Garrett, R C Conaway, J W Conaway, N Arai
Nucleic Acids Res. 1992 Jun 25; 20(12): 3250. doi: 10.1093/nar/20.12.3250
PMCID:
PMC312466
SummaryPage BrowsePDF–197K
18.
Identification and characterization of a nucleolar phosphoprotein, Nopp140, as a transcription factor.
L H Miau, C J Chang, W H Tsai, S C Lee
Mol Cell Biol. 1997 Jan; 17(1): 230–239. doi: 10.1128/mcb.17.1.230
PMCID:
PMC231747
SummaryPDF–535K
19.
Unliganded thyroid hormone receptor alpha can target TATA-binding protein for transcriptional repression.
J D Fondell, F Brunel, K Hisatake, R G Roeder
Mol Cell Biol. 1996 Jan; 16(1): 281–287. doi: 10.1128/mcb.16.1.281
PMCID:
PMC231001
SummaryPDF–432K
20.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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