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Items: 19

1.
Multiplexed kinase interactome profiling quantifies cellular network activity and plasticity
Martin Golkowski, Andrea Lius, Tanmay Sapre, Ho-Tak Lau, Taylor Moreno, Dustin J. Maly, Shao-En Ong
Mol Cell. Author manuscript; available in PMC 2023 Apr 4.
Published in final edited form as: Mol Cell. 2023 Mar 2; 83(5): 803–818.e8. Published online 2023 Feb 2. doi: 10.1016/j.molcel.2023.01.015
PMCID:
PMC10072906
AbstractArticlePDF–4.2M
2.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
3.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
4.
MicroRNA-24-3p regulates neuronal differentiation by controlling hippocalcin expression
Min-Jeong Kang, Shin-Young Park, Joong-Soo Han
Cell Mol Life Sci. 2019 Nov; 76(22): 4569–4580. Published online 2019 Sep 5. doi: 10.1007/s00018-019-03290-3
PMCID:
PMC6841749
AbstractArticlePDF–5.1M
5.
Biophysical and functional characterization of hippocalcin mutants responsible for human dystonia
Nordine Helassa, Svetlana V. Antonyuk, Lu-Yun Lian, Lee P. Haynes, Robert D. Burgoyne
Hum Mol Genet. 2017 Jul 1; 26(13): 2426–2435. Published online 2017 Apr 7. doi: 10.1093/hmg/ddx133
PMCID:
PMC5886089
AbstractArticlePDF–578K
6.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
7.
The BioPlex Network: A Systematic Exploration of the Human Interactome
Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2016 Jul 16.
Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043
PMCID:
PMC4617211
AbstractArticlePDF–2.2M
8.
Mutations in HPCA Cause Autosomal-Recessive Primary Isolated Dystonia
Gavin Charlesworth, Plamena R. Angelova, Fernando Bartolomé-Robledo, Mina Ryten, Daniah Trabzuni, Maria Stamelou, Andrey Y. Abramov, Kailash P. Bhatia, Nicholas W. Wood
Am J Hum Genet. 2015 Apr 2; 96(4): 657–665. Published online 2015 Mar 19. doi: 10.1016/j.ajhg.2015.02.007
PMCID:
PMC4385177
AbstractArticlePDF–659K
9.
A Novel Acetylation Cycle of Transcription Co-activator Yes-associated Protein That Is Downstream of Hippo Pathway Is Triggered in Response to SN2 Alkylating Agents
Shoji Hata, Jun Hirayama, Hiroaki Kajiho, Kentaro Nakagawa, Yutaka Hata, Toshiaki Katada, Makoto Furutani-Seiki, Hiroshi Nishina
J Biol Chem. 2012 Jun 22; 287(26): 22089–22098. Published online 2012 Apr 27. doi: 10.1074/jbc.M111.334714
PMCID:
PMC3381167
AbstractArticlePDF–3.2M
10.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
11.
Dynamics and calcium sensitivity of the Ca2+/myristoyl switch protein hippocalcin in living cells
Dermott W. O'Callaghan, Alexei V. Tepikin, Robert D. Burgoyne
J Cell Biol. 2003 Nov 24; 163(4): 715–721. doi: 10.1083/jcb.200306042
PMCID:
PMC2173692
AbstractArticlePDF–440K
12.
Mapping of transcription start sites of human retina expressed genes
Valeria Roni, Ronald Carpio, Bernd Wissinger
BMC Genomics. 2007; 8: 42. Published online 2007 Feb 7. doi: 10.1186/1471-2164-8-42
PMCID:
PMC1802077
AbstractArticlePDF–578K
13.
High-affinity interaction of the N-terminal myristoylation motif of the neuronal calcium sensor protein hippocalcin with phosphatidylinositol 4,5-bisphosphate
Dermott W. O'Callaghan, Lee P. Haynes, Robert D. Burgoyne
Biochem J. 2005 Oct 15; 391(Pt 2): 231–238. Prepublished online 2005 Jul 29. Published online 2005 Oct 10. doi: 10.1042/BJ20051001
PMCID:
PMC1276920
AbstractArticlePDF–801K
14.
Identification of Ca2+-dependent binding partners for the neuronal calcium sensor protein neurocalcin delta: interaction with actin, clathrin and tubulin.
Lenka Ivings, Stephen R Pennington, Roz Jenkins, Jamie L Weiss, Robert D Burgoyne
Biochem J. 2002 May 1; 363(Pt 3): 599–608. doi: 10.1042/0264-6021:3630599
PMCID:
PMC1222513
SummaryPDF–365K
15.
The MAP kinase kinase kinase MLK2 co-localizes with activated JNK along microtubules and associates with kinesin superfamily motor KIF3.
K Nagata, A Puls, C Futter, P Aspenstrom, E Schaefer, T Nakata, N Hirokawa, A Hall
EMBO J. 1998 Jan 2; 17(1): 149–158. doi: 10.1093/emboj/17.1.149
PMCID:
PMC1170366
SummaryPDF–781K
16.
The genetics of idiopathic torsion dystonia.
N A Fletcher
J Med Genet. 1990 Jul; 27(7): 409–412. doi: 10.1136/jmg.27.7.409
PMCID:
PMC1017175
SummaryPage BrowsePDF–722K
17.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K
18.
NAIP interacts with hippocalcin and protects neurons against calcium-induced cell death through caspase-3-dependent and -independent pathways
Eric A. Mercer, Laura Korhonen, Ylva Skoglösa, Per-Anders Olsson, Jyrki P. Kukkonen, Dan Lindholm
EMBO J. 2000 Jul 17; 19(14): 3597–3607. doi: 10.1093/emboj/19.14.3597
PMCID:
PMC313967
AbstractArticlePDF–728K
19.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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