Mfsd4b2l1 major facilitator superfamily domain containing 4B2 like 1 [Rattus norvegicus (Norway rat)] - Gene - NCBI

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Mfsd4b2l1 major facilitator superfamily domain containing 4B2 like 1 [ Rattus norvegicus (Norway rat) ]
Gene ID: 309809, updated on 9-Dec-2024

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Gene Sequences (FASTA)

Transcript sequences (FASTA)

Protein sequences(FASTA)

In addition, your package will include a detailed data report in both TSV and JSONL formats.

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Summary

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Official Symbol

Mfsd4b2l1provided by RGD

Official Full Name

major facilitator superfamily domain containing 4B2 like 1provided by RGD

Primary source

RGD:1310495

See related

EnsemblRapid:ENSRNOG00000000589 AllianceGenome:RGD:1310495

Gene type

protein coding

RefSeq status

VALIDATED

Organism

Rattus norvegicus

Lineage

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus

Also known as

RGD1310495

Summary

Predicted to enable D-glucose transmembrane transporter activity. Predicted to be involved in D-glucose transmembrane transport. Predicted to be located in membrane. Orthologous to human MFSD4B (major facilitator superfamily domain containing 4B). [provided by Alliance of Genome Resources, Dec 2024]

Expression

Biased expression in Kidney (RPKM 401.9) and Liver (RPKM 111.5) See more

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Genomic context

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See Mfsd4b2l1 in Genome Data Viewer

Location:

20q12

Exon count:

4

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Annotation release | Status | Assembly | Chr | Location
RS_2024_02 | current | GRCr8 (GCF_036323735.1) | 20 | NC_086038.1 (44991384..45004590, complement)
RS_2023_06 | previous assembly | mRatBN7.2 (GCF_015227675.2) | 20 | NC_051355.1 (43436857..43450064, complement)
106 | previous assembly | Rnor_6.0 (GCF_000001895.5) | 20 | NC_005119.4 (45119102..45138663, complement)

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Chromosome 20 - NC_086038.1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_086038.1 Chromosome 20 Reference GRCr8

NC_051355.1 Chromosome 20 Reference mRatBN7.2 Primary Assembly

NC_005119.4 Chromosome 20 Reference Rnor_6.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

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Expression

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See details

A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages

Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)

BioProject: PRJNA238328

Publication: PMID 24510058

Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
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General gene information

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Homology

Orthologs from OrthoDB

Gene Ontology Provided by RGD

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Function | Evidence Code | Pubs

enables D-glucose transmembrane transporter activity

IBA
Inferred from Biological aspect of Ancestor
more info

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Process | Evidence Code | Pubs

involved_in hexose transmembrane transport

IEA
Inferred from Electronic Annotation
more info

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Component | Evidence Code | Pubs

located_in membrane

IEA
Inferred from Electronic Annotation
more info

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General protein information

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Preferred Names

similar to KIAA1919 protein

Names

sodium-dependent glucose transporter 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001402077.1 → NP_001389006.1 similar to KIAA1919 protein

Status: VALIDATED

Source sequence(s)

JAXUCZ010000020

UniProtKB/TrEMBL

A0A8I5ZZD1, A6KIH9

Related

ENSRNOP00000084459.2, ENSRNOT00000107452.2

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference GRCr8

Genomic

1. NC_086038.1 Reference GRCr8

Range

44991384..45004590 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

Related sequences

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Nucleotide | Protein | Strain
Heading | Accession and Version
genomic | CH474051.1 | EDL87834.1
genomic | JAXUCZ010000020.1 (44991384..45004590) | None | BN/NHsdMcwi
mRNA | FQ210617.1 | None | Sprague-Dawley

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Additional links

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Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases

Bgee database

RGD1310495 gene expression

BioGPS

BioGPS

CTD: Comparative Toxicogenomics Database

CTD: Comparative Toxicogenomics Database - RGD1310495

Ingenuity Pathways Analysis

Ingenuity Pathways Analysis

Kyoto Encyclopedia of Genes and Genomes

Kyoto Encyclopedia of Genes and Genomes

OrthoDB catalog of orthologs

Orthologs

Research Materials

Addgene Non-profit plasmid repository

Get Plasmids - Addgene

GenScript latest version of gene cDNA ORF Clone

GenScript latest version of gene cDNA ORF Clone

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Supplemental Content

Table of contents

Summary

Genomic context

Genomic regions, transcripts, and products

Expression

Bibliography

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General protein information

NCBI Reference Sequences (RefSeq)

Related sequences

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Mfsd4b2l1 major facilitator superfamily domain containing 4B2 like 1 [Rattus nor...
Mfsd4b2l1 major facilitator superfamily domain containing 4B2 like 1 [Rattus norvegicus]
Gene ID:309809

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