LOC102555145 uncharacterized LOC102555145 [Rattus norvegicus (Norway rat)] - Gene - NCBI

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LOC102555145 uncharacterized LOC102555145 [ Rattus norvegicus (Norway rat) ]
Gene ID: 102555145, updated on 17-Aug-2024

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Gene Sequences (FASTA)

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Summary

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Symbol

LOC102555145provided by RGD

Full Name

uncharacterized LOC102555145provided by RGD

Primary source

RGD:7593803

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AllianceGenome:RGD:7593803

Gene type

ncRNA

RefSeq status

MODEL

Organism

Rattus norvegicus

Lineage

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus

Expression

Biased expression in Muscle (RPKM 19.5), Testes (RPKM 7.3) and 4 other tissues See more

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Genomic context

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See LOC102555145 in Genome Data Viewer

Location:

9q36

Exon count:

7

Items 1 - 3 of 3

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Annotation release | Status | Assembly | Chr | Location
RS_2024_02 | current | GRCr8 (GCF_036323735.1) | 9 | NC_086027.1 (98422262..98443942, complement)
RS_2023_06 | previous assembly | mRatBN7.2 (GCF_015227675.2) | 9 | NC_051344.1 (90974641..90981811, complement)
106 | previous assembly | Rnor_6.0 (GCF_000001895.5) | 9 | NC_005108.4 (97531120..97552654, complement)

Items 1 - 3 of 3

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Chromosome 9 - NC_086027.1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_086027.1 Chromosome 9 Reference GRCr8

NC_051344.1 Chromosome 9 Reference mRatBN7.2 Primary Assembly

NC_005108.4 Chromosome 9 Reference Rnor_6.0 Primary Assembly

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Expression

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See details

A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages

Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)

BioProject: PRJNA238328

Publication: PMID 24510058

Analysis date: Mon Jun 6 17:44:12 2016

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference GRCr8

Genomic

1. NC_086027.1 Reference GRCr8

Range

98422262..98443942 complement

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RNA

1. XR_005489314.2 RNA Sequence

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Items 1 - 1 of 1

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Nucleotide | Protein | Strain
Heading | Accession and Version
genomic | JAXUCZ010000009.1 (98422262..98443942) | None | BN/NHsdMcwi

Items 1 - 1 of 1

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LOC102555145 uncharacterized LOC102555145 [Rattus norvegicus]
LOC102555145 uncharacterized LOC102555145 [Rattus norvegicus]
Gene ID:102555145

Gene

Gene Links for GEO Profiles (Select 49128659) (1)
Gene

Homologene neighbors for GEO Profiles (Select 62662262) (0)
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