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    Gprasp3 G protein-coupled receptor associated sorting protein family member 3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 317407, updated on 9-Dec-2024

    Summary

    Official Symbol
    Gprasp3provided by RGD
    Official Full Name
    G protein-coupled receptor associated sorting protein family member 3provided by RGD
    Primary source
    RGD:1303224
    See related
    EnsemblRapid:ENSRNOG00000003191 AllianceGenome:RGD:1303224
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Bhlhb9; KKPROT; p60TRP
    Summary
    Predicted to enable protein homodimerization activity. Predicted to be involved in learning or memory; negative regulation of neuron apoptotic process; and positive regulation of nervous system development. Predicted to be active in cytosol and nucleus. Orthologous to several human genes including GPRASP3 (G protein-coupled receptor associated sorting protein family member 3). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Brain (RPKM 78.8), Kidney (RPKM 58.9) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Gprasp3 in Genome Data Viewer
    Location:
    Xq32
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (103639366..103644561)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (98847591..98854949)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (106359981..106393457)

    Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S9, pseudogene 8 Neighboring gene G protein-coupled receptor associated sorting protein 2 Neighboring gene small nucleolar RNA SNORA57 Neighboring gene adipocyte-related X-chromosome expressed sequence 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    is_active_in cytosol  
    is_active_in nucleus  

    General protein information

    Preferred Names
    G protein-coupled receptor associated sorting protein 3
    Names
    basic helix-loop-helix domain containing, class B, 9
    basic helix-loop-helix family member B9
    protein BHLHB9
    transcription regulator of 60 kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_207611.3NP_997494.1  G protein-coupled receptor associated sorting protein 3

      See identical proteins and their annotated locations for NP_997494.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000021
      UniProtKB/Swiss-Prot
      Q71HP2
      UniProtKB/TrEMBL
      A6KT33
      Related
      ENSRNOP00000042638.4, ENSRNOT00000049375.7
      Conserved Domains (1) summary
      pfam04826
      Location:306533
      Arm_2; Armadillo-like

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086039.1 Reference GRCr8

      Range
      103639366..103644561
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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