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LOC102547573 uncharacterized LOC102547573 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102547573, updated on 17-Aug-2024

Summary

Symbol
LOC102547573provided by RGD
Full Name
uncharacterized LOC102547573provided by RGD
Primary source
RGD:7525733
See related
AllianceGenome:RGD:7525733
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Lung (RPKM 12.3) and Kidney (RPKM 0.8) See more
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Genomic context

See LOC102547573 in Genome Data Viewer
Location:
1q55
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (265696599..265711781, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (255694149..255706423, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (277462759..277467607, complement)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA17 Neighboring gene DNA cross-link repair 1A Neighboring gene NHL repeat containing 2 Neighboring gene uncharacterized LOC120100064 Neighboring gene adrenoceptor beta 1 Neighboring gene uncharacterized LOC102547814

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    265696599..265711781 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005499762.2 RNA Sequence

  2. XR_590745.4 RNA Sequence

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